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<span style="color: rgb(31, 73, 125);">Dear fellow researcher, </span></p>
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<span style="color: rgb(31, 73, 125);">At ISMB this year, the Cytoscape development team will be staging an all new advanced Cytoscape tutorial. It will be held the afternoon of <span class="aBn" data-term="goog_490854027" tabindex="0" style="border-bottom: 1px dashed rgb(204, 204, 204); position: relative; top: -2px; z-index: 0;"><span class="aQJ" style="position: relative; top: 2px; z-index: -1;">Friday
July 21</span></span> at the ISMB site in Prague.<u></u><u></u></span></p>
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<span style="color: rgb(31, 73, 125);">This tutorial is especially interesting given the fact that Cytoscape is being transformed as part of a Cytoscape Cyber Infrastructure and will support a full blown REST Api.</span></p>
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<span style="color: rgb(31, 73, 125);"><u></u> <u></u></span></p>
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<span style="color: rgb(31, 73, 125);">You can sign up for it on the ISMB web site: <a href="https://www.iscb.org/ismbeccb2017-registration" target="_blank" data-saferedirecturl="https://www.google.com/url?hl=en&q=https://www.iscb.org/ismbeccb2017-registration&source=gmail&ust=1495279681877000&usg=AFQjCNF5IeDaKSuNNSQBJzDfSWZFYsbNOw" style="color: rgb(17, 85, 204);">https://www.iscb.org/<wbr>ismbeccb2017-registration</a><u></u><u></u></span></p>
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<font color="#1f497d">(note: the early bird registration ends the 15th of June)</font></p>
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<span style="color: rgb(31, 73, 125);"><u></u> <u></u></span></p>
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<span style="color: rgb(31, 73, 125);">The full information is here: <a href="https://www.iscb.org/ismbeccb2017-program/tutorials#p4" target="_blank" data-saferedirecturl="https://www.google.com/url?hl=en&q=https://www.iscb.org/ismbeccb2017-program/tutorials%23p4&source=gmail&ust=1495279681877000&usg=AFQjCNEU-3tnwtX9VATVTiljK2yUjD4Srw" style="color: rgb(17, 85, 204);">https://www.iscb.org/<wbr>ismbeccb2017-program/<wbr>tutorials#p4</a><u></u><u></u></span></p>
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<span style="color: rgb(31, 73, 125);"><u></u> <u></u></span></p>
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<span style="color: rgb(31, 73, 125);">The brief version is below.<u></u><u></u></span></p>
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<span style="color: rgb(31, 73, 125);"><u></u> <u></u></span></p>
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<span style="color: rgb(31, 73, 125);">Hope to see you there!<u></u><u></u></span></p>
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<span style="color: rgb(31, 73, 125);"><br>
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<span style="color: rgb(31, 73, 125);">The Cytoscape development team</span></p>
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<span style="color: rgb(31, 73, 125);"><u></u> <u></u></span></p>
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<font size="4"><b><span style="color: rgb(31, 73, 125);">Network Analysis in Cytoscape: Advanced Topics</span></b><span style="color: rgb(31, 73, 125);"> </span></font></p>
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Intended audience<u></u><u></u></h1>
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The <i>Advanced Topics</i> tutorial is intended for an audience that has prior experience with at least one of the following:<u></u><u></u></p>
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<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Cytoscape software<u></u><u></u></p>
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<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Data integration and analytical methods<u></u><u></u></p>
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<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Network biology concepts<u></u><u></u></p>
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<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Bioinformatics analysis pipelines<u></u><u></u></p>
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Goals, objectives and motivations<u></u><u></u></h1>
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By the end of tutorial, you should be able to:<u></u><u></u></p>
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<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Know when and how to use Cytoscape in your research area<u></u><u></u></p>
<p class="m_5867187551747516231MsoListParagraphCxSpMiddle" style="margin: 0in 0in 0.0001pt 0.5in; font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(34, 34, 34); background-color: rgb(255, 255, 255);">
<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Identify and discriminate relevant source of interactions, networks and datasets<u></u><u></u></p>
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<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Command programmatic control over Cytoscape<u></u><u></u></p>
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<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Integrate Cytoscape into your bioinformatics pipelines<u></u><u></u></p>
<p class="m_5867187551747516231MsoListParagraphCxSpMiddle" style="margin: 0in 0in 0.0001pt 0.5in; font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(34, 34, 34); background-color: rgb(255, 255, 255);">
<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Publish, share and export networks online<u></u><u></u></p>
<p class="m_5867187551747516231MsoListParagraphCxSpLast" style="margin: 0in 0in 0.0001pt 0.5in; font-size: 11pt; font-family: Calibri, sans-serif; color: rgb(34, 34, 34); background-color: rgb(255, 255, 255);">
<u></u><span style="font-family: Wingdings;">§<span style="font-stretch: normal; font-size: 7pt; line-height: normal; font-family: "Times New Roman";"> </span></span><u></u>Generalize network analysis methods to multiple problem domains</p>
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