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ISMB 2024 CompMS – Abstract submission deadline (April 19, 2024)!
by BeNeLux bioinformaticians forum 09 Apr '24

09 Apr '24

— ISMB 2024 CompMS – Abstract submission deadline (April 19, 2024) — [https://lh7-us.googleusercontent.com/f9j9UXvz5I5hmMTJ3S2NKoPmaNHhpBB8GCML2l…] We would like to remind you that the abstract submission deadline for the Computational Mass Spectrometry (CompMS) session at the ISMB 2024 conference is April 19, 2024. This is also the deadline to apply for an early-career researcher travel fellowship! We encourage you to submit your abstract today and join us during the ISMB 2024 conference in Montreal, Canada (or virtually) on July 12–16, 2024. ⏰ We are delighted to offer travel fellowships for early-career researchers (ECRs). Fill out this form<https://forms.gle/HVYXSjQkMLvG87Zq5> to apply for one of the C$400 travel fellowships. Eligibility criteria include being an early career researcher (undergraduate student, graduate student, postdoctoral researcher, or equivalent) and having submitted an abstract to the CompMS track. 🍻 Join us for the CompMS social event at 3 Brasseurs (1255A Crescent St, Montreal, Quebec H3G 2B1, Canada) on Monday July 13, 2024 for a fun get-together with your fellow computational mass spectrometry enthusiasts! Register for the social event during your ISMB conference registration. Key dates April 19, 2024: Abstract & travel fellowship submission deadline May 13, 2024: Talk/poster acceptance notifications May 20, 2024: Late poster submission deadline May 28, 2024: Late poster acceptance notifications July 12–16, 2024: ISMB conference * CompMS COSI: July 13, 2024 * CompMS social event @ 3 Brasseurs: July 15, 2024 * Venue: Palais de Congrés de Montréal, Montreal, Canada / virtual * Website: https://www.iscb.org/ismb2024 Abstract submission deadline The abstract submission deadline for ISMB 2024 is fast approaching! Submit your abstract to ISMB to present your work at the leading bioinformatics/computational biology conference. Attend the CompMS session to learn about the latest algorithmic advances in computational mass spectrometry. Please remember to select the CompMS COSI as your session of interest upon submitting your abstract. Call for abstracts: https://www.iscb.org/ismb2024/submissions/abstracts ECR travel fellowship application: https://forms.gle/HVYXSjQkMLvG87Zq5 We look forward to seeing you at ISMB! The CompMS organizing committee. Wout Bittremieux Marie Brunet Isabell Bludau Lindsay Pino Timo Sachsenberg More information about ISMB 2024: The Intelligent Systems for Molecular Biology (ISMB) is the world’s largest bioinformatics/computational biology conference. Every year it brings together scientists from computer science, molecular biology, mathematics, statistics, and related fields and provides an intense multidisciplinary forum for disseminating the latest developments in bioinformatics/computational biology. The conference fosters fresh dialogues, collaboration and learning opportunities, and is a gathering which shapes the future of the field. At the heart of the scientific program are ISCB’s Communities of Special Interest (COSIs), enabling community involvement and bolstering ISMB’s reputation as the leading conference in the field. The CompMS COSI promotes the efficient, high-quality analysis of mass spectrometry data through dissemination and training in existing approaches and discussion of new, innovative approaches. The CompMS initiative aims to exploit synergies between different mass spectrometry-based application domains, in particular proteomics, metabolomics, and lipidomics. We are grateful to acknowledge sponsoring by MSAID. [https://lh7-us.googleusercontent.com/bEa6rCYCKkTteYzTZYLpAxOUq2Vzgq5-11G47s…]

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Fwd: Vacancy - Assistant Professor in Artificial Intelligence for Multi-Modal Pathology Data - Amsterdam UMC
by BeNeLux bioinformaticians forum 03 Apr '24

03 Apr '24

-------- Forwarded Message -------- Subject: Vacancy - Assistant Professor in Artificial Intelligence for Multi-Modal Pathology Data - Amsterdam UMC Date: Tue, 2 Apr 2024 14:16:44 +0000 From: Ylstra, B. <b.ylstra(a)amsterdamumc.nl> To: Belien, J.A.M. <jam.belien(a)amsterdamumc.nl> Dear colleagues, I am excited to announce that our vacancy for a tenure track position in Artificial Intelligence for Multi-Modal Pathology Data in our Pathology department at Amsterdam UMC has just been published / open for the coming 2 weeks. Please spread across your network now, so that we can find a great new colleague in AI to join our Pathology research team in the near future. Vacancy - Assistant Professor in Artificial Intelligence for Multi-Modal Pathology Data - Amsterdam UMC <https://werkenbij.amsterdamumc.org/en/vacatures/research/assistant-professo…> https://tulpintranet.nl/upload_mm/c/f/e/55769_fullimage_handtekening%203.png Prof. Dr. Bauke Ylstra Tumor Genome Analysis Core Dept. of Pathology | Loc. VUmc | CCA-122 | De Boelelaan 1117 | 1081HV Amsterdam T: +31.20.4442495 | M: +31.6.38306756 | E: b.ylstra(a)amsterdamumc.nl www.amsterdamumc.nl <https://www.amsterdamumc.nl/> | www.amsterdamumc.org <http://www.amsterdamumc.org/> | www.TGAC.nl <http://www.tgac.nl/> ______________________________________________________ AmsterdamUMC disclaimer : www.amsterdamumc.org/disclaimers -- Groetjes, Anton _____________ _______________________________________________________ | | | | _ _ ___,| K. Anton Feenstra | | / \ / \'| | | IBIVU/Bioinformatics - Vrije Universiteit Amsterdam | |( | )| | | De Boelelaan 1111 - 1081 HV Amsterdam - Netherlands | | \_/ \_/ | | | Tel: +312059 87783 - skype: kafeenstra - room NU 12A31| | |Feenstra(a)few.vu.nl -www.few.vu.nl/~feenstra/ | | | "I Can't Shake It" (Dinosaur Jr) | |_____________|_______________________________________________________|

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[Inserm workshop] Massive Genomic Data: Statistical and Bioinformatic Advances, Sept 16th-18th 2024, Bordeaux
by BeNeLux bioinformaticians forum 29 Mar '24

29 Mar '24

Dear all, We are organizing an INSERM workshop entitled "Massive Genomic Data: Statistical and Bioinformatic advances" from September 16th to 18th 2024 in Bordeaux. This workshop will gather 16 renowned speakers who will be present the whole time to interact with participants. You will find information about the program and how to register here: https://ateliersinserm.dakini-pco.com/en/home-66-41.php (INSERM workshops are also described at the top of this page: https://ateliersinserm.dakini-pco.com/en/) The deadline to register is June 14th 2024. Best, -- Anne-Louise Leutenegger, Ph.D. Inserm NeuroDiderot U1141, GenMedStroke Lab Hôpital Robert Debré 48 boulevard Sérurier, 75019 Paris http://cvscience.aviesan.fr/cv/719/anne-louise-leutenegger https://neurodiderot.u-paris.fr/

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Call For Papers - 36th IEEE International Conference on Tools with Artificial Intelligence - Oct. 30-Nov. 1 2024 - Herndon, VA, USA
by BeNeLux bioinformaticians forum 29 Mar '24

29 Mar '24

Dear Colleagues, The 36th IEEE International Conference on Tools with Artificial Intelligence (ICTAI) organizing committee is inviting you to submit your research papers. The conference will be held in person, on October 30th till November 1st, 2024 in Herndon, Virginia, USA. Topics include (but not limited to): 1. AI Foundations 2. AI in Domain-specific Applications 3. AI in Computer Systems 4. AI in Data Analytics, Data Mining and Big Data 5. AI in Smart Cities 6. Machine Learning 7. Knowledge Representation, Reasoning, Cognition 8. AI and Decision Systems 9. Uncertainty in AI 10. Natural Language Processing 11. AI and Societal Impact Important Dates Paper submission: July 1, 2024 Acceptance notification: August 18, 2024 Camera-ready: September 16, 2024 To submit your manuscript, please use the following link: https://easychair.org/conferences/?conf=ictai2024 For more information, please don't hesitate to contact the General Chair Dr. Manolis Koubarakis (National and Kapodistrian University of Athens) at koubarak(a)di.uoa.gr, Program Chair Dr. Jessica Lin (George Mason University) at jessica(a)gmu.edu and Financial and Registration Chair Dr. Alexiou (Kennesaw State University) at malexiou(a)kennesaw.edu. We look forward to your submissions. Sachin Sharma ICTAI 2024 Publicity Chair

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Scientific training officer at SciLifeLab
by BeNeLux bioinformaticians forum 27 Mar '24

27 Mar '24

Hi all, I like to direct your attention to the adverstisement in Sweden/Stockholm where SciLifeLab, the National Research Infrastructure in technology- and Data-driven life science, and the Training Hub is looking for a new team member to the training team (a Scientific Training Officer with Open Science and FAIR experience). Are you interested in training and education? That training is to be openly accessible and FAIR? Are you enthusiastic about training and maybe with a background in Data Stewardship, Open Science, FAIR or other relevant topics? Then maybe you are the next member to our team at the Training Hub in SciLifeLab, Swden/Stockholm. SciLifeLab is the national research infrastructure in technology and data-driven life science in Sweden and distributed across 6 sites. Interested or know someone that might be? Please spread it in your networks. For more information do not hesitate to contact traininghub(a)scilifelab.se and read more at https://www.scilifelab.se/career/scientific-training-officer/ Deadline is 15th of April. Best regards, Alex Alexander Botzki Team Lead Technology Training, ELIXIR Belgium Training Coordinator VIB Technology Training ELIXIR Belgium Technologiepark-Zwijnaarde 75, 9052 Ghent – Belgium https://technologytraining.sites.vib.be<https://technologytraining.sites.vib.be/> | https://www.elixir-belgium.org/training [Graphical user interface Description automatically generated] [Hx1KyM2Q09lnAAAAAElFTkSuQmCC]

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Call For Papers - 36th IEEE International Conference on Tools with Artificial Intelligence - Oct. 30-Nov1, 2024 - Herndon, VA, USA
by BeNeLux bioinformaticians forum 19 Mar '24

19 Mar '24

Dear Colleagues, The 36th IEEE International Conference on Tools with Artificial Intelligence (ICTAI) organizing committee is inviting you to submit your research papers. The conference will be held in person, on October 30th till November 1st, 2024 in Herndon, Virginia, USA. Topics include (but not limited to): 1. AI Foundations 2. AI in Domain-specific Applications 3. AI in Computer Systems 4. AI in Data Analytics, Data Mining and Big Data 5. AI in Smart Cities 6. Machine Learning 7. Knowledge Representation, Reasoning, Cognition 8. AI and Decision Systems 9. Uncertainty in AI 10. Natural Language Processing 11. AI and Societal Impact Important Dates Paper submission: July 1, 2024 Acceptance notification: August 18, 2024 Camera-ready: September 16, 2024 To submit your manuscript, please use the following link: https://easychair.org/conferences/?conf=ictai2024 For more information, please don't hesitate to contact the General Chair Dr. Manolis Koubarakis (National and Kapodistrian University of Athens) at koubarak(a)di.uoa.gr and Program Chair Dr. Jessica Lin (George Mason University) at jessica(a)gmu.edu. We look forward to your submissions. Sachin Sharma ICTAI 2024 Publicity Chair

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Making training material FAIR
by BeNeLux bioinformaticians forum 19 Mar '24

19 Mar '24

[A close-up of a logo Description automatically generated] Making training material FAIR is not an easy task! The FAIR training focus group of ELIXIR just released this handbook that can be used to shape your FAIR training. The 10 chapters handbook can help you figure your own puzzle and fit all pieces to shape your material to be FAIR. This handbook is the work of many contributors<https://elixir-europe-training.github.io/ELIXIR-TrP-FAIR-training-handbook/…> and is a live project, welcoming feedback and in constant improvement. Check it out and let's go FAIR: FAIR training handbook<https://elixir-europe-training.github.io/ELIXIR-TrP-FAIR-training-handbook/> [A close-up of a book Description automatically generated] Bruna Piereck Bioinformatics Training Expert VIB Technology Training ELIXIR Belgium Technologiepark-Zwijnaarde 75, 9052 Ghent - Belgium https://technologytraining.sites.vib.be<https://technologytraining.sites.vib.be/> | https://www.elixir-belgium.org/training [Graphical user interface Description automatically generated]<https://vib.be/en/technology> [cid:image004.png@01DA7A05.13693CA0]<https://www.elixir-belgium.org/training>

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PhD position in computational pangenomics
by BeNeLux bioinformaticians forum 19 Mar '24

19 Mar '24

Dear all, The Wageningen Bioinformatics is hiring a PhD student. Are you interested in algorithm development? Do you want to innovate methods for computational pangenomics and mine massive amounts of genomics data? Then this PhD vacancy may be of interest to you - please find more information and an application link (deadline April 15, 2024) here: https://www.wur.nl/en/vacancy/phd-student-computational-pangenomics.htm Sandra Smit & Dick de Ridder Bioinformatics Group, Wageningen University

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Two open vacancies Sciensano (bioinformatician long read sequencing and computer scientist/engineer HPC)
by BeNeLux bioinformaticians forum 18 Mar '24

18 Mar '24

Dear all, The Bioinformatics Platform at the Belgian Institute of Health (www.sciensano.be) currently has two open vacancies: - Bioinformatician long-read sequencing: https://jobs.sciensano.be/content/jobpage.asp?a=DETAIL&jdkid=1246&l=DUTCH - Computer scientist/engineer high-performance computing: https://jobs.sciensano.be/content/jobpage.asp?a=DETAIL&jdkid=1245&l=DUTCH Sincerely, K Kevin Vanneste, PhD Bioinformatician Transversal activities in Applied Genomics (TAG) Tel: +32 (0)2 642 50 65 [cid:image001.jpg@01DA7956.D24B4EB0] Rue Juliette Wytsmanstraat 14 * 1050 Brussels www.sciensano.be<http://www.sciensano.be/> P Please consider the environment before printing this e-mail

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VIB Training opportunities: Long-read data - high quality genome assembly and variant and structural variants analysis
by BeNeLux bioinformaticians forum 15 Mar '24

15 Mar '24

Dear all, As a collaborative effort, VIB Technology training is organizing bioinformatics and analysis training events starting from long-read data: High-Quality Genome Assembly with Long-Read Technology: https://shorturl.at/flvNZ (start date: 18/04/2024) and Variant and structural variant analysis using long-read data https://shorturl.at/DKOR9 (start date: 23/04/2024) Please be quick and register on our VIB training web site! Best regards, Alex

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