The detailed timetable for the CAT15 course has been updated Best, Pedro Fernandes Mon, Sept 28th Day #1 09:30 - 11:00 Introduction. Genotypes and Phenotypes - Examples from the literature. 11:00 - 11:30 Coffee Break 11:30 - 12:30 Overview of Genetic Variation. 12:30 - 14:00 Lunch Break 14:00 - 16:00 Technologies to acquire data: genotyping, sequencing, aCGH 16:00 - 16:30 Tea Break 16:30 - 18:00 Practical: Databases of human variation - Functional Annotation. Tue, Sept 29th Day #2 09:30 - 11:00 Morning Wrap-up (what have we done so far?) How to link phenotypes and genotypes. Linkage mapping and association. 11:00 - 11:30 Coffee Break 11:30 - 12:30 Practical: PLINK. Association Studies - GWAS - WTCCC 12:30 - 14:00 Lunch Break 14:00 - 16:00 Practical: PLINK continued and GCTA 16:00 - 16:30 Tea Break 16:30 - 18:00 Discussions - Open topics (Privacy, Replication, Most findings are false) Wed, Sept 30th Day #3 09:30 - 11:00 Morning Wrap-up (what have we done so far?) Intorducion to SAM, BAM, VCFtools 11:00 - 11:30 Coffee Break 11:30 - 12:30 Practical: SAM, BAM, VCFtools 12:30 - 14:00 Lunch Break 14:00 - 16:00 Predicting Phenotypes. Mendelian vs. Complex. Practical: Genetic Risk Scores. 16:00 - 16:30 Tea Break 16:30 - 18:00 Discussions - Open topics (Privacy, Replication, most findings are false) Thu, Oct 1st Day #4 09:30 - 11:00 Morning Wrap-up (what have we done so far?) Introduction to Epigenome Roadmap 11:00 - 11:30 Coffee Break 11:30 - 12:30 Epigenome Roadmap. Examples and Discussion. 12:30 - 14:00 Lunch Break 14:00 - 16:00 Practical: EWAS and eQTLs with R 16:00 - 16:30 Tea Break 16:30 - 18:00 Final wrap-up session -- Pedro Fernandes GTPB Coordinator Instituto Gulbenkian de Ciência Apartado 14 2781-901 OEIRAS PORTUGAL Tel +351 21 4407912 http://gtpb.igc.gulbenkian.pt _______________________________________________ Gtpb mailing list Gtpb@igc.gulbenkian.pt https://lists.igc.gulbenkian.pt/mailman/listinfo/gtpb