November 2010 - beg-bogas@psb.ugent.be

[Beg-bogas] [BOGAS] #150: sequence to GV
by BOGAS 03 Apr '12

03 Apr '12

#150: sequence to GV ------------------------------+--------------------------------------------- Reporter: liste | Owner: thabe Type: enhancement | Status: new Priority: major | Milestone: BOGAS_v4 Component: ArteminiServices | Version: Keywords: | ------------------------------+--------------------------------------------- need a diff system of getting seq to GV (art??), because loading full chrom of Medtr already is difficult. save will also not work due to server upload file limit -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/150> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] [BOGAS] #151: also a bogas login link on the genome page
by BOGAS 03 Apr '12

03 Apr '12

#151: also a bogas login link on the genome page -------------------------+-------------------------------------------------- Reporter: thpar | Owner: liste Type: enhancement | Status: new Priority: trivial | Milestone: BOGAS_v4 Component: Website | Version: Keywords: | -------------------------+-------------------------------------------------- http://bioinformatics.psb.ugent.be/genomes/ -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/151> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] [BOGAS] #161: prot DOM section and figure
by BOGAS 30 Mar '12

30 Mar '12

#161: prot DOM section and figure ---------------------+------------------------------------------------------ Reporter: liste | Owner: liste Type: task | Status: new Priority: major | Milestone: BOGAS_v4 Component: Website | Version: Keywords: | ---------------------+------------------------------------------------------ check section + fig to see if multiple occurrences of the same domain is available. (if map to hash -> no, replace by array or so) -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/161> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] BOGAS for tomato
by Garcia Virginie 22 Nov '10

22 Nov '10

Dear BOGAS webmaster, I am bioinformatician in Fruit biology laboratory (INRA Bordeaux), a member of the EUSOL project. Some people of my lab were in Natal (Brazil) last week and brought back to me a tutorial on BOGAS use for tomato. It seems to be a very usefool tool to access tomato genome annotation. I don't know the policy for data access. As eusol member, is it possible to obtain a login for Solanum lycopersicon ? Sincerely, Virginie -- --------------------------------------------------------------------------------- Virginie Garcia INRA de Bordeaux UMR Biologie du Fruit <http://www.bordeaux.inra.fr/umr619/> Plateforme Génome-Transcriptome du CGFB <http://www.pgfb.u-bordeaux2.fr> Tel: 05 57 12 23 88 mailto:vgarcia@bordeaux.inra.fr <mailto:vgarcia@bordeaux.inra.fr> ---------------------------------------------------------------------------------

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[Beg-bogas] update error Connection
by liste＠psb.vib-ugent.be 22 Nov '10

22 Nov '10

2010/11/22 14:22:07 An error occured connecting to the database server Error message below: DBI connect('bogas_mella_v1:psbsql02:3306','bogas',...) failed: Unknown database 'bogas_mella_v1' at /www/group/biocomp/extra/bioinformatics_prod/webtools/sandbox/liste/BOGAS/trunk/src/perl/modules/BOGAS/DB.pm line 260

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[Beg-bogas] update error Connection
by liste＠psb.vib-ugent.be 22 Nov '10

22 Nov '10

2010/11/22 14:18:34 An error occured connecting to the database server Error message below: DBI connect('bogas_mella_v1:psbsql02:3306','bogas',...) failed: Unknown database 'bogas_mella_v1' at /www/group/biocomp/extra/bioinformatics_prod/webtools/sandbox/liste/BOGAS/trunk/src/perl/modules/BOGAS/DB.pm line 260

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[Beg-bogas] update error Connection
by liste＠psb.vib-ugent.be 22 Nov '10

22 Nov '10

2010/11/22 14:15:04 An error occured connecting to the database server Error message below: DBI connect('bogas_mella_v1:psbsql02:3306','bogas',...) failed: Unknown database 'bogas_mella_v1' at /www/group/biocomp/extra/bioinformatics_prod/webtools/sandbox/liste/BOGAS/trunk/src/perl/modules/BOGAS/DB.pm line 260

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[Beg-bogas] Qusetion for changing password of the account in BOGAS
by Jongsun Park 10 Nov '10

10 Nov '10

Dear, I would like to change my password of the account, of which name is starflr. Till now I couldn't find any link to modify it. I look forward for your reply. Have a good day. Jongsun ==================================================== Jongsun Park, Ph.D Fungal Bioinformatics Laboratory and Center for Fungal Pathogenesis College of Agricultural and Life Science, Seoul National University Seoul, 151-921, Korea Email: starflr(a)snu.ac.kr Tel: 82-2-880-4919

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[Beg-bogas] [BOGAS] #170: layouting header section
by BOGAS 10 Nov '10

10 Nov '10

#170: layouting header section -------------------------+-------------------------------------------------- Reporter: liste | Owner: liste Type: enhancement | Status: new Priority: minor | Milestone: BOGAS_v4 Component: Website | Version: Keywords: | -------------------------+-------------------------------------------------- people does not seem to fin d there way to the profiles, log out , home etc links on the top of a page. => perhaps change bg-color (greyish??) -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/170> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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