#150: sequence to GV
------------------------------+---------------------------------------------
Reporter: liste | Owner: thabe
Type: enhancement | Status: new
Priority: major | Milestone: BOGAS_v4
Component: ArteminiServices | Version:
Keywords: |
------------------------------+---------------------------------------------
need a diff system of getting seq to GV (art??), because loading full
chrom of Medtr already is difficult.
save will also not work due to server upload file limit
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Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/150>
BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas>
Bioinformatics Online Genome Annotation Service
#161: prot DOM section and figure
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Reporter: liste | Owner: liste
Type: task | Status: new
Priority: major | Milestone: BOGAS_v4
Component: Website | Version:
Keywords: |
---------------------+------------------------------------------------------
check section + fig to see if multiple occurrences of the same domain is
available.
(if map to hash -> no, replace by array or so)
--
Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/161>
BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas>
Bioinformatics Online Genome Annotation Service
To whom it may concer,
I was working this morning on the Ectocarpus genome through the public
database and try do view the locus Esi0080_0017 in Artemini.
Unfortunately, Java opens, the sequence is loading, but after, I have an
error message "Fatal error!" "The Application encountered and unforeseen
error......Message: complement (114421..114550)"
I hope you will be able to fix the problem very soon.
Thank you very much in advance to consider my request.
Yours sincerely.
Thierry.
--
Thierry Tonon
Abiotic Stress and Functional Genomics of Seaweeds
UMR 7139 CNRS-UPMC
Station Biologique
Place Georges Teissier
29682 Roscoff cedex
France
Tel.: +33 (0)2 98 29 23 30
Fax: +33 (0)2 98 29 23 85
Emails: tonon(a)sb-roscoff.fr
thitonon(a)gmail.com
http://www.sb-roscoff.fr/UMR7139/
Dear Stephan: Hope you are doing well. I change my computer and I forgot my
login/password to access to the bathycoccus genome. Could you please give me
that information?+
best regards.
Rodrigo
2010/3/29 <beg-bogas(a)psb.vib-ugent.be>
> Dear,
>
> please find your invitation code to access the bathycoccus 454 data and its
> annotation.
>
>
> http://bioinformatics.psb.ugent.be/webtools/bogas/users/invitationcode/766b…
>
> by clicking on this link you will be directed to a page to register, choose
> your login and password etc.
> If the link doesn't work, try to go to _url and enter
> 766b6fd897514d6db8ff29ea9b66a982
>
> Best regards
> Stephane
>
>
>
--
Rodrigo De la Iglesia, PhD
Profesor Asistente
Laboratorio de Microbiología Marina
Facultad de Ciencias Biológicas
P. Universidad Católica de Chile
Alameda 340, Casilla 114-D
56-2-6862845 (rdelaigl(a)bio.puc.cl)
#164: add link to previous release
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Reporter: strom | Owner: liste
Type: enhancement | Status: new
Priority: major | Milestone: BOGAS_v4
Component: Website | Version:
Keywords: |
-------------------------+--------------------------------------------------
Have a link and search option to go to the previous release of an
annotation. This means that we have 2 databases for a same genome project.
What should be shown is a non-editable, non-browsable snapshot from the
previous release (structure, blast hits, domains etc) in a new window.
Also, with a search one should be able to seach (not default) in the
previous release (using keywords or locus ID) and find the corresponding
locus in the current release.
In the transition period between 2 releases this might be quite useful.
--
Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/164>
BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas>
Bioinformatics Online Genome Annotation Service
Dear Sirs,
I am studying red algal retrotransposons. From the publication by
Nature, I found that Ectocarpus genome webpage is available.
Then, I visited to the webpage of Ectocarpus (http://bioinformatics.psb.ugent.be/webtools/bogas/
), but could not open the page.
Please let me know the procedures for getting the user account.
Sincerely yours,
S. Takio
**********************************************
Dr. Susumu TAKIO
Center for Marine Environment Studies
Kumamoto University
Kurokami 2-39-1
Kumamoto 860-8555 Japan
TEL & FAX: (81)96-342-3443
mail: stakio(a)gpo.kumamoto-u.ac.jp
**********************************************
