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October 2011

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12 discussions

[Beg-bogas] Error in InterProScan job iprscan-20111014-0511426072174
by support＠ebi.ac.uk 14 Oct '11

14 Oct '11

System command [find] failed : cd /nfs/public/ro/es/appbin/linux-x86_64/iprscan-4.8/tmp/20111014/iprscan-20111014-0511426072174 && find /nfs/public/ro/es/appbin/linux-x86_64/iprscan-4.8/tmp/20111014/iprscan-20111014-0511426072174 -name \*.raw > /nfs/public/ro/es/appbin/linux-x86_64/iprscan-4.8/tmp/20111014/iprscan-20111014-0511426072174/merged.raw.files: exit status 1; No such file or directory -- 256 To help us solve the problem, please copy and paste this error and email it to the administrator <a href="mailto:support@ebi.ac.uk?subject=Error in InterProScan job iprscan-20111014-0511426072174">support(a)ebi.ac.uk</a>. Sorry about the inconvenience and thank you for using InterProScan.

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[Beg-bogas] [BOGAS] #175: intron checks
by BOGAS 11 Oct '11

11 Oct '11

#175: intron checks -------------------------+-------------------------------------------------- Reporter: brhel | Owner: Lieven Type: enhancement | Status: new Priority: critical | Milestone: Component: Website | Version: Keywords: | -------------------------+-------------------------------------------------- It would be **nice** if you could add a 'tag' to the gene information (in Genomeview / Artemini) which would be recognized by BOGAS so that it doesn't run it's intron checking procedure anymore. In my case (Micromonas) we have some documented non-canonical introns which would not get trough the checking procedure. -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/175> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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