April 2011 - beg-bogas@psb.ugent.be - maillist.psb.ugent.be

[Beg-bogas] [BOGAS] #150: sequence to GV
by BOGAS 03 Apr '12

03 Apr '12

#150: sequence to GV ------------------------------+--------------------------------------------- Reporter: liste | Owner: thabe Type: enhancement | Status: new Priority: major | Milestone: BOGAS_v4 Component: ArteminiServices | Version: Keywords: | ------------------------------+--------------------------------------------- need a diff system of getting seq to GV (art??), because loading full chrom of Medtr already is difficult. save will also not work due to server upload file limit -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/150> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] [BOGAS] #151: also a bogas login link on the genome page
by BOGAS 03 Apr '12

03 Apr '12

#151: also a bogas login link on the genome page -------------------------+-------------------------------------------------- Reporter: thpar | Owner: liste Type: enhancement | Status: new Priority: trivial | Milestone: BOGAS_v4 Component: Website | Version: Keywords: | -------------------------+-------------------------------------------------- http://bioinformatics.psb.ugent.be/genomes/ -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/151> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] [BOGAS] #161: prot DOM section and figure
by BOGAS 30 Mar '12

30 Mar '12

#161: prot DOM section and figure ---------------------+------------------------------------------------------ Reporter: liste | Owner: liste Type: task | Status: new Priority: major | Milestone: BOGAS_v4 Component: Website | Version: Keywords: | ---------------------+------------------------------------------------------ check section + fig to see if multiple occurrences of the same domain is available. (if map to hash -> no, replace by array or so) -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/161> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] access to the Gent Eucalyptus genome annotation
by Jacqueline Grima-Pettenati 21 Apr '11

21 Apr '11

Dear Yves, We are working on several genes families in Eucalyptus including MYB, AuxIAA, ARF, lignin biosynthetic pathway which will be part of the genome annotation paper as well as accompanying papers. Hitherto, we've been using the phytozome annotation but if possible, we would like to compare with your annotation. I would appreciate if you could provide me an access to your annotation. Thanks in advance for your help Jacqueline Grima-Pettenati Directrice de Recherches CNRS Eucalyptus Functional Genomics Team LRSV, UMR 5546 CNRS/Université Toulouse III 24, chemin de Borde-Rouge BP 42617, Auzeville 31326, Castanet Tolosan, FRANCE New phone number Tel: + 33 534 32 38 13 Fax: + 33 534 32 38 02 New email : grima(a)lrsv.ups-tlse.fr web site: http://www.lrsv.ups-tlse.fr/?-Genomique-fonctionnelle-de-l- http://www2.toulouse.inra.fr/ifr40/fr/2_Theme/5-Biol-du-dev.htm

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