-------- Original Message --------
Hil Lieven,
I would like to place some text on "my" page in the Ectocarpus Wiki
site (the link "G Proteins" on the main page). When I put the text
into the window (invoked by pressing "Create this page") and press
"Save", teh browser swithc to a page with a Czech error report, whcih
after reloding changes to a page sayin "Sorry, you don't have enough
rights to continue. Perhaps you forgot to login?". However, I am
logged. Could you, please, look at this problem?
Thanks,
Marek
Cituji lieven sterck <lieven.sterck@psb.ugent.be>:
> Hi Marek,
>
> I fear you just demonstrated why we use the artemini as a check (in
> stead of making the coordinate box on the webpage editable) :-[ :
> there is an error in the coordinate set you provide:
> ......
> ,439639..439695,440076..440186,440581..440670,441533..441669,4422224..442297,442889.........
> artemini complains because the seq is only ~1.2Mb long and your
> coordinate is ~4.4Mb .
>
> grtz,
> lieven
>
>
> melias@natur.cuni.cz wrote:
>> Hi Lieven,
>>
>> it seems that you indeed partially solved the problem with saving
>> exon coordinates as I now could save the coordinates of the gene
>> Esi0031_0121 using the pption 'Modify Using Artemini (full
>> sequence)'. However, even this option does not work for the gene
>> Esi0008_0081, which should actually be merged with the gene
>> Esi0008_0082 so that the coordinates should be as follows:
>>
>> 435416..436165,437250..437506,437809..437896,438082..438272,438896..439229,439639..439695,440076..440186,440581..440670,441533..441669,4422224..442297,442889..442998,443534..443650,444305..444505,445069..445218,445540..445680,446186..446371,447092..447184 The error message is still the same - it is out of the range of the sequence. Could you, please, have a look on
>> this?
>> thanks,
>> Marek
>>
>>
>> Cituji lieven sterck <lieven.sterck@psb.ugent.be>:
>>
>>> Hi Marek,
>>>
>>> We solved this the following way:
>>> You now have a choice between 2 possible downloads in artemini: small
>>> sequence (as it was) and the whole sequence ('Modify Using Artemini
>>> (full sequence)' ). With the whoel sequence you should have the problem
>>> anymore (but it can take longer to download it).
>>>
>>> grtz,
>>> lieven
>>>
>>> melias@natur.cuni.cz wrote:
>>>> Hi Lieven,
>>>>
>>>> I onece more cannot save coordinates of a gene moeld edited in Artemini.
>>>> I need to save the following coordinates for the gene Esi0031_0121:
>>>>
>>>> 650149..650208,650956..651132,651761..651904,652788..652932,653394..653455,654128..654328,654791..654934,655760..655847,662896..663023,663661..663789,664631..664729,665569..665796,666203..666318,666898..667006,667469..667526,668411..668577,669887..670197,670893..670998,672023..672127,672633..672761,673309..673461,674180..674335,675415..675510 When I put them to the respective widow and press "OK", the following error announcement
>>>> appears:
>>>>
>>>> Cannot apply changes because of location error: Parse error at
>>>> this point:
>>>> ..664729,665569..665796,666203..666318,666898..667006,667469..667526,668411..668577,669887..670197,670893..670998,672023..672127,672633..672761,673309..673461,674180..674335,675415..675510)): garbage at the end of the location
>>>> string
>>>>
>>>> Could you, please, have a look on this?
>>>>
>>>> Thanks,
>>>> Marek
>>>>
>>>>
>>>>
>>>> Cituji Lieven Sterck <lieven.sterck@psb.ugent.be>:
>>>>
>>>>> Hi Marek,
>>>>>
>>>>> I tried it myself and I think it's due to the size of the scaffold. Itis
>>>>> to big to be displayed on a page (it also happens with other large
>>>>> scaffolds apparently).
>>>>> We see how we can work around it.
>>>>>
>>>>> sorry and thanks for noticing this,
>>>>> best regards,
>>>>> lieven
>>>>>
>>>>>
>>>>>> Hi Lieven,
>>>>>>
>>>>>> I am not able to download the nucleotide sequence of the supercontig
>>>>>> sctg_0. After clicking on the hyperlink "F" in the BLAST output the
>>>>>> sequence cannot be downloaded and the browser replies with an error
>>>>>> message. However, other supercontig sequences can be displayed by
>>>>>> clicking on the corresponding hyperlink on the very same BLAST output
>>>>>> page. I do not understand at all what is going on.
>>>>>> Thanks,
>>>>>> Marek
>>>>>>
>>>>>> Cituji Lieven Sterck <lieven.sterck@psb.ugent.be>:
>>>>>>
>>>>>>> Hi Marek,
>>>>>>>
>>>>>>> This is interesting information!
>>>>>>> I'm (our lab is) not responsible for producing the sequence,
>>>>>>> that job is
>>>>>>> done by GenoScope.
>>>>>>>
>>>>>>> The best you can do for the moment is report these kind of information
>>>>>>> on
>>>>>>> the wiki-page or in the structure comment field on the edit page
>>>>>>> (preferably in both :-) ).
>>>>>>> If the sequences is missing (Ns) than there is nothing much we can do
>>>>>>> (have you tried searching the Ectsi_Inf2kb blast database? maybe the
>>>>>>> missign piece is presen but not assembled into a larger contig??).
>>>>>>> If you notice that a gene has been 'split' over two contigs, we can
>>>>>>> report
>>>>>>> this to the sequencing center and they can use it for making a next
>>>>>>> assembly.
>>>>>>>
>>>>>>> grtz,
>>>>>>> lieven
>>>>>>>
>>>>>>>
>>>>>>>> Hi Lieven,
>>>>>>>>
>>>>>>>> I really highly appreciate your prompt assistance. I will probably
>>>>>>>> never cease having additionals troubles - here is another such: what
>>>>>>>> shoul I do if I found that it is impossible to create the correct gene
>>>>>>>> model because the underlying genome sequence is incomplete? Or even
>>>>>>>> worse, what to do with genes split into two separate supercontigs? For
>>>>>>>> example the models Esi0169_0001 and Esi0169_0002 on the very beginning
>>>>>>>> of the supercontig sctg_169 actually represent fragments of a signle
>>>>>>>> gene, whose intial exon is not repesented on the supercontig but seems
>>>>>>>> to reside near the 3' end of the small supercontig sctg_945. You
>>>>>>>> probably do not have any data linking these supercontigs together but
>>>>>>>> I have very good reasons to believe that they belong together, because
>>>>>>>> the gene is very vell conserved and the two pieces encoded by the two
>>>>>>>> supercontigs fit into the expected structure of the gene. How should I
>>>>>>>> annotate the gene?
>>>>>>>> Thanks,
>>>>>>>> Marek
>>>>>>>>
>>>>>>>> Cituji Lieven Sterck <lieven.sterck@psb.ugent.be>:
>>>>>>>>
>>>>>>>>> Hi Marek,
>>>>>>>>>
>>>>>>>>> This is a not so easy issue (for us! not for you).
>>>>>>>>> the best option would be to select the model labeled 'CDS' and then
>>>>>>>>> insert
>>>>>>>>> your new coordinates. The other models you can ignore.
>>>>>>>>>
>>>>>>>>> grtz,
>>>>>>>>> lieven
>>>>>>>>>
>>>>>>>>>> Hi Lieven,
>>>>>>>>>>
>>>>>>>>>> thanks for the comments, it now seems that he problem with
>>>>>>>>>> saving the
>>>>>>>>>> changes of gene models has been solved. I am sorry, however, to say
>>>>>>>>>> that I have just encountered another point requiring a discussion
>>>>>>>>>> with
>>>>>>>>>> you. I found that some genes I am annotating are incorrectly
>>>>>>>>>> predicted
>>>>>>>>>> as two or even three independent loci. How to correct these
>>>>>>>>>> instances?
>>>>>>>>>> Should I merge somehow the models into one, which I subsequetly
>>>>>>>>>> modify
>>>>>>>>>> bu inserting correct coordinates? If yes, how should I do it? Or
>>>>>>>>>> should I simply insert the correct coordinates into a field
>>>>>>>>>> of one of
>>>>>>>>>> the partial "submodels" and ignore or delete the remaining?
>>>>>>>>>> Thanks,
>>>>>>>>>> Marek
>>>>>>>>>>
>>>>>>>>>> Cituji Lieven Sterck <lieven.sterck@psb.ugent.be>:
>>>>>>>>>>
>>>>>>>>>>> Hi Marek,
>>>>>>>>>>>
>>>>>>>>>>> I spotted the problem. You are talking about locus
>>>>>>>>>>> Esi0425_0013, no?
>>>>>>>>>>> I can see that you made an edit in the DB, but the problem is that
>>>>>>>>>>> there
>>>>>>>>>>> seems to be a double save. If you check in the history the last-1
>>>>>>>>>>> date
>>>>>>>>>>> you'll see your edit.
>>>>>>>>>>>
>>>>>>>>>>> We are sorting this out as quickly as possible.
>>>>>>>>>>>
>>>>>>>>>>> best regards,
>>>>>>>>>>> lieven
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>>> Dear Lieven,
>>>>>>>>>>>>
>>>>>>>>>>>> thanks for the change in artemini, this is exactly what I think
>>>>>>>>>>>> will
>>>>>>>>>>>> make the annotation much more straightforward. I checked
>>>>>>>>>>>> the system
>>>>>>>>>>>> with one gene (correcting coordinates of one exon). I saved the
>>>>>>>>>>>> modified coordinates using "Save to server" command in "File" menu
>>>>>>>>>>>> option, but the model has not changed in the database yet. Are you
>>>>>>>>>>>> reviewing opur annotations before incorporating them into the
>>>>>>>>>>>> database? Or what is going on?
>>>>>>>>>>>> Thanks. Cheers,
>>>>>>>>>>>>
>>>>>>>>>>>> Marek
>>>>>>>>>>>>
>>>>>>>>>>>> Cituji Lieven Sterck <lieven.sterck@psb.ugent.be>:
>>>>>>>>>>>>
>>>>>>>>>>>>> Dear Marek,
>>>>>>>>>>>>>
>>>>>>>>>>>>> we made some adjustments to the artemini functionality and as a
>>>>>>>>>>>>> result
>>>>>>>>>>>>> the
>>>>>>>>>>>>> coordinates you see in the artemini window are now the same asin
>>>>>>>>>>>>> the
>>>>>>>>>>>>> webpage (= they are in reference to the whole scaffold).
>>>>>>>>>>>>> You can just copy and paste your coordinates into the artemini,
>>>>>>>>>>>>> save
>>>>>>>>>>>>> it
>>>>>>>>>>>>> and they will be entered into the DB.
>>>>>>>>>>>>>
>>>>>>>>>>>>> I hope this can satisfy your needs. If not, please do
>>>>>>>>>>>>> let me know,
>>>>>>>>>>>>> so
>>>>>>>>>>>>> we
>>>>>>>>>>>>> can think of better solution.
>>>>>>>>>>>>>
>>>>>>>>>>>>> thanks and best regards,
>>>>>>>>>>>>> lieven
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>> ---------------------------- Original Message
>>>>>>>>>>>>> ----------------------------
>>>>>>>>>>>>> Subject: Re: Ectocarpus proteins
>>>>>>>>>>>>> From: "Lieven Sterck" <lieven.sterck@psb.ugent.be>
>>>>>>>>>>>>> Date: Thu, November 8, 2007 11:17 pm
>>>>>>>>>>>>> To: melias@natur.cuni.cz
>>>>>>>>>>>>> Cc: cock@sb-roscoff.fr
>>>>>>>>>>>>> beg-bogas@psb.ugent.be
>>>>>>>>>>>>> -------------------------------------------------------------------------- Dear
>>>>>>>>>>>>> Marek,
>>>>>>>>>>>>>
>>>>>>>>>>>>> You can find a manual on how to use the artemis tool on
>>>>>>>>>>>>> the Sanger
>>>>>>>>>>>>> Institute website.
>>>>>>>>>>>>> May I inquire if you find the artemis tool itself not
>>>>>>>>>>>>> user-friendly
>>>>>>>>>>>>> or
>>>>>>>>>>>>> rather the way it is incoporated in the portal?
>>>>>>>>>>>>>
>>>>>>>>>>>>> The coordinates in the artemini view differ indeed from the ones
>>>>>>>>>>>>> on
>>>>>>>>>>>>> the
>>>>>>>>>>>>> webpage. this is because the sequence you get to see in the
>>>>>>>>>>>>> artemini
>>>>>>>>>>>>> view
>>>>>>>>>>>>> is only a subpart of the whole scaffold (this in order to let the
>>>>>>>>>>>>> procedure go faster). The coordinates you see in artemini are in
>>>>>>>>>>>>> reference
>>>>>>>>>>>>> to the subpart while you have (and also on the webpage) them in
>>>>>>>>>>>>> reference
>>>>>>>>>>>>> of the whole scaffold.
>>>>>>>>>>>>>
>>>>>>>>>>>>> In theory it is possible to make the coordinates 'box' editable.
>>>>>>>>>>>>> but,
>>>>>>>>>>>>> ...
>>>>>>>>>>>>> i'm a little bit reluctant to do this due to bad experience with
>>>>>>>>>>>>> this
>>>>>>>>>>>>> approach in previous projects. We noticied it is very easy to
>>>>>>>>>>>>> include
>>>>>>>>>>>>> mistakes this way (aspecially for non experienced annotators).
>>>>>>>>>>>>> That
>>>>>>>>>>>>> is
>>>>>>>>>>>>> why
>>>>>>>>>>>>> we include the artemini system in this version (where some basic
>>>>>>>>>>>>> checks
>>>>>>>>>>>>> on
>>>>>>>>>>>>> the structure are performed and you have the visual check of the
>>>>>>>>>>>>> structure).
>>>>>>>>>>>>> But I also completely understand your point that for more
>>>>>>>>>>>>> experienced
>>>>>>>>>>>>> users this might not be ideal...
>>>>>>>>>>>>> What we also can do is to add a function in the artemini to
>>>>>>>>>>>>> 'transfer'
>>>>>>>>>>>>> the
>>>>>>>>>>>>> coordinates you enter (in reference of the whole scaffold) onto
>>>>>>>>>>>>> the
>>>>>>>>>>>>> subpart in artemini. That way you could just paste your
>>>>>>>>>>>>> coordinates
>>>>>>>>>>>>> into
>>>>>>>>>>>>> the coordinate box of artemini, push the 'transfer' button and
>>>>>>>>>>>>> they
>>>>>>>>>>>>> will
>>>>>>>>>>>>> be adjusted onto the subpart. You can then also profit from the
>>>>>>>>>>>>> visual
>>>>>>>>>>>>> check. When you then save your modifications they will be entered
>>>>>>>>>>>>> to
>>>>>>>>>>>>> the
>>>>>>>>>>>>> DB.
>>>>>>>>>>>>> Do you think this might be more useful? or does it still
>>>>>>>>>>>>> sounds to
>>>>>>>>>>>>> much
>>>>>>>>>>>>> of
>>>>>>>>>>>>> a hastle?
>>>>>>>>>>>>>
>>>>>>>>>>>>> best and thanks for the feedback,
>>>>>>>>>>>>> lieven
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>> Dear Lieven,
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> thanks for the link, I have successfully downloaded the protein
>>>>>>>>>>>>>> database. I would like to start making corrections of the gene
>>>>>>>>>>>>>> models
>>>>>>>>>>>>>> I
>>>>>>>>>>>>> foud to be incorrectly predicted ion the rpesent annotation. Is
>>>>>>>>>>>>> there
>>>>>>>>>>>>> any
>>>>>>>>>>>>> manual how to work with the Artemini tool? I found it not be too
>>>>>>>>>>>>> user-friendly. For instance, I do not understand why the exon
>>>>>>>>>>>>> coordinates indicated by Artemini differs from the actual
>>>>>>>>>>>>> coordinates
>>>>>>>>>>>>> on
>>>>>>>>>>>>> supercontigs? Just take the gene Esi0425_0013. The present
>>>>>>>>>>>>>> coordinates, with an incorrect first exon, are as follows:
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> 47430..47455,47682..47802,48669..48716,49305..49400,50478..50556,51041..51197,53081..53171 I would like to change the first exon so that the coordinates
>>>>>>>>>>>>>> are
>>>>>>>>>>>>>> like
>>>>>>>>>>>>> this:
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> 45460..45476,47682..47802,48669..48716,49305..49400,50478..50556,51041..51197,53081..53171 The coordinates given for this gene in Artemini are as
>>>>>>>>>>>>>> follows:
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> 3555..3580,3807..3927,4794..4841,5430..5525,6603..6681,7166..7322,9206..9296 Why there is the difference? I have to say that I would
>>>>>>>>>>>>>> highly
>>>>>>>>>>>>>> appreciate if it is possible to edit gene models just by typing
>>>>>>>>>>>>>> the
>>>>>>>>>>>>> correct coordinates of exons I found by comparing my CDS models
>>>>>>>>>>>>> with
>>>>>>>>>>>>> the
>>>>>>>>>>>>> contig sequence. Is this possible?
>>>>>>>>>>>>>> Thank you and best regards,
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> Marek E.
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> Cituji Lieven Sterck <lieven.sterck@psb.ugent.be>:
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>> Dear Marek,
>>>>>>>>>>>>>>> the download is available from this address:
>>>>>>>>>>>>>>> https://bioinformatics.psb.ugent.be/gdb/ectocarpus
>>>>>>>>>>>>>>> (login/passw : psbguest/ectocarpus)
>>>>>>>>>>>>>>> Apologises that I haven't informed you earlier, it is quite
>>>>>>>>>>>>>>> hectic
>>>>>>>>>>>>>>> for
>>>>>>>>>>>>> the
>>>>>>>>>>>>>>> moment.
>>>>>>>>>>>>>>> please let me know if this doesn't work.
>>>>>>>>>>>>>>> best regards,
>>>>>>>>>>>>>>> lieven
>>>>>>>>>>>>>>>> Dear Lieven,
>>>>>>>>>>>>>>>> you mentioned that from this week's Monday the whole predicted
>>>>>>>>>>>>> proteome of Ectocarpus should be available for download. I tried
>>>>>>>>>>>>> to
>>>>>>>>>>>>> find
>>>>>>>>>>>>> a
>>>>>>>>>>>>> link to the file at BOGAS web page but haven't found any. Could
>>>>>>>>>>>>> you,
>>>>>>>>>>>>> please, let me know, where to go for the downloading?
>>>>>>>>>>>>>>>> Thanks, best regards,
>>>>>>>>>>>>>>>> Marek Elias
>>>>>>>>>>>>>>>> Cituji lieven sterck <lieven.sterck@psb.ugent.be>:
>>>>>>>>>>>>>>>>> Dear Marek,
>>>>>>>>>>>>>>>>> From monday on you will be able to download all predicted
>>>>>>>>>>>>>>>>> protein/genes
>>>>>>>>>>>>>>>>> in batch.
>>>>>>>>>>>>>>>>> sorry for the delay.
>>>>>>>>>>>>>>>>> regards,
>>>>>>>>>>>>>>>>> lieven
>>>>>>>>>>>>>>>>> Kenny Billiau wrote:
>>>>>>>>>>>>>>>>>> -------- Original Message --------
>>>>>>>>>>>>>>>>>> Subject: Re: password to the Ectocarpus genome portal
>>>>>>>>>>>>>>>>>> Date: Fri, 02 Nov 2007 15:49:39 +0100
>>>>>>>>>>>>>>>>>> From: melias@natur.cuni.cz
>>>>>>>>>>>>>>>>>> To: Kenny Billiau <kenny.billiau@psb.ugent.be>
>>>>>>>>>>>>>>>>>> References:
>>>>>>>>>>>>>>>>>> <20071102114032.ry1oc3gmmjcckc8s@www.natur.cuni.cz>
>>>>>>>>>>>>>>>>>> <472B0B6C.8060706@psb.ugent.be>
>>>>>>>>>>>>>>>>>> Hi Kenny,
>>>>>>>>>>>>>>>>>> thanks for the advice with getting the access to the
>>>>>>>>>>>>>>>>>> Ectocarpus
>>>>>>>>>>>>> portal. I have created an accounted and started to work. Is it
>>>>>>>>>>>>> possible to download the set of predicted protein sequences? It
>>>>>>>>>>>>> would suit me better to do some local stand-alone searches
>>>>>>>>>>>>> (BLAST,
>>>>>>>>>>>>>>>>>> HMMER) than to use only your web BLAST server. Thanks
>>>>>>>>>>>>>>>>>> again,
>>>>>>>>>>>>>>>>>> Marek
>>>>>>>>>>>>>>>>>> Cituji Kenny Billiau <kenny.billiau@psb.ugent.be>:
>>>>>>>>>>>>>>>>>>> Hi,
>>>>>>>>>>>>>>>>>>> I've sent you an invitation mail so you can choose your own
>>>>>>>>>>>>> login/password. You can use this login to access the ectocarpus
>>>>>>>>>>>>> wiki
>>>>>>>>>>>>>>>>>>> as
>>>>>>>>>>>>>>>>>>> well,
>>>>>>>>>>>>>>>>>>> Kenny
>>>>>>>>>>>>>>>>>>> melias@natur.cuni.cz wrote:
>>>>>>>>>>>>>>>>>>>> Dear Dr. Billiau,
>>>>>>>>>>>>>>>>>>>> I am a member of the Ectocarpus genome consortium. Mark
>>>>>>>>>>>>>>>>>>>> Cock
>>>>>>>>>>>>>>>>>>>> sent
>>>>>>>>>>>>>>>>>>>> us a message announcing the Ectocarpus genome annotation
>>>>>>>>>>>>>>>>>>>> portal and redirected us to you for obtaining a password
>>>>>>>>>>>>>>>>>>>> to
>>>>>>>>>>>>>>>>>>>> the
>>>>>>>>>>>>> portal. I have one to the BLAST page at the Ghent web site
>>>>>>>>>>>>> (user: ectocarpus, password: sillysilly) but it does not work
>>>>>>>>>>>>> for the portal at
>>>>>>>>>>>>>>>>>>>> http://bioinformatics.psb.ugent.be/webtools/bogas/. May
>>>>>>>>>>>>>>>>>>>> be
>>>>>>>>>>>>>>>>>>>> this
>>>>>>>>>>>>> is not the right link to the portal, so please, let me
>>>>>>>>>>>>> know how
>>>>>>>>>>>>> can
>>>>>>>>>>>>> I
>>>>>>>>>>>>> access the portal so taht I can start annotating. Thank
>>>>>>>>>>>>> you in advance and best regards,
>>>>>>>>>>>>>>>>>>>> Marek Elias
>>>>>>>>>>>>>>>>>>>> Department of Botany
>>>>>>>>>>>>>>>>>>>> Faculty of Science
>>>>>>>>>>>>>>>>>>>> Charles University
>>>>>>>>>>>>>>>>>>>> Benatska 2
>>>>>>>>>>>>>>>>>>>> 128 01 Praha 2
>>>>>>>>>>>>>>>>>>>> Czech Republic
>>>>>>>>>>>>>>>>>>> --
>>>>>>>>>>>>>>>>>>> ==================================================================
>>>>>>>>>>>>> Kenny Billiau
>>>>>>>>>>>>>>>>>>> Web Developer
>>>>>>>>>>>>>>>>>>> Tel:+32 (0)9 331 36 95 fax:+32 (0)9
>>>>>>>>>>>>>>>>>>> 3313809
>>>>>>>>>>>>> VIB Department of Plant Systems Biology, Ghent University
>>>>>>>>>>>>>>>>>>> Technologiepark 927, 9052 Gent, BELGIUM
>>>>>>>>>>>>>>>>>>> kenny.billiau@psb.ugent.be
>>>>>>>>>>>>>>>>>>> http://bioinformatics.psb.ugent.be
>>>>>>>>>>>>> ==================================================================
>>>>>>>>>>>>>>>>> --
>>>>>>>>>>>>>>>>> ==============================================================
>>>>>>>>>>>>>>>>> Lieven
>>>>>>>>>>>>> Sterck Predoctoral fellow Tel:+32
>>>>>>>>>>>>> (0)9
>>>>>>>>>>>>> 3313821 Fax:+32 (0)9 3313809 VIB Department
>>>>>>>>>>>>> of
>>>>>>>>>>>>> Plant
>>>>>>>>>>>>> Systems Biology, UGent
>>>>>>>>>>>>>>>>> Bioinformatics and Evolutionary Genomics Division
>>>>>>>>>>>>>>>>> Technologiepark 927, B-9052 Gent, Belgium
>>>>>>>>>>>>>>>>> Email:
>>>>>>>>>>>>> lieven.sterck@psb.ugent.be
>>>>>>>>>>>>>>>>> Website: http://bioinformatics.psb.ugent.be
>>>>>>>>>>>>>>>>> --------------------------------------------------------------
>>>>>>>>>>>>>>>>> Algal
>>>>>>>>>>>>> Genetics Group
>>>>>>>>>>>>>>>>> UMR 7139 CNRS-UPMC
>>>>>>>>>>>>>>>>> VÃÂÃÂÃÂÃÂÃÂÃÂÃÂégÃÂÃÂÃÂÃÂÃÂÃÂÃÂétaux Marins
>>>>>>>>>>>>>>>>> et
>>>>>>>>>>>>>>>>> BiomolÃÂÃÂÃÂÃÂÃÂÃÂÃÂécules (Marine
>>>>>>>>>>>>>>>>> Plants and
>>>>>>>>>>>>>>>>> Biomolecules)
>>>>>>>>>>>>> Station Biologique Place Georges Teissier, BP74
>>>>>>>>>>>>>>>>> 29682 Roscoff Cedex, France
>>>>>>>>>>>>>>>>> Website: http://www.sb-roscoff.fr/UMR7139/en/genetics.html
>>>>>>>>>>>>>>>>> ==============================================================
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>> --
>>> ==============================================================
>>> Lieven Sterck Predoctoral fellow
>>>
>>> Tel:+32 (0)9 3313821 Fax:+32 (0)9 3313809
>>> VIB Department of Plant Systems Biology, UGent
>>> Bioinformatics and Evolutionary Genomics Division
>>> Technologiepark 927, B-9052 Gent, Belgium
>>> Email: lieven.sterck@psb.ugent.be
>>> Website: http://bioinformatics.psb.ugent.be
>>>
>>> --------------------------------------------------------------
>>> Algal Genetics Group
>>> UMR 7139 CNRS-UPMC
>>> Végétaux Marins et Biomolécules (Marine Plants and Biomolecules)
>>> Station Biologique Place Georges Teissier, BP74
>>> 29682 Roscoff Cedex, France
>>> Website: http://www.sb-roscoff.fr/UMR7139/en/genetics.html
>>> ==============================================================
>>
>
> --
> ==============================================================
> Lieven Sterck Predoctoral fellow
>
> Tel:+32 (0)9 3313821 Fax:+32 (0)9 3313809
> VIB Department of Plant Systems Biology, UGent
> Bioinformatics and Evolutionary Genomics Division
> Technologiepark 927, B-9052 Gent, Belgium
> Email: lieven.sterck@psb.ugent.be
> Website: http://bioinformatics.psb.ugent.be
>
> --------------------------------------------------------------
> Algal Genetics Group
> UMR 7139 CNRS-UPMC
> Végétaux Marins et Biomolécules (Marine Plants and Biomolecules)
> Station Biologique Place Georges Teissier, BP74
> 29682 Roscoff Cedex, France
> Website: http://www.sb-roscoff.fr/UMR7139/en/genetics.html
> ==============================================================
--
==============================================================
Lieven Sterck Predoctoral fellow
Tel:+32 (0)9 3313821 Fax:+32 (0)9 3313809
VIB Department of Plant Systems Biology, UGent
Bioinformatics and Evolutionary Genomics Division
Technologiepark 927, B-9052 Gent, Belgium
Email: lieven.sterck@psb.ugent.be
Website: http://bioinformatics.psb.ugent.be
--------------------------------------------------------------
Algal Genetics Group
UMR 7139 CNRS-UPMC
Végétaux Marins et Biomolécules (Marine Plants and Biomolecules)
Station Biologique
Place Georges Teissier, BP74
29682 Roscoff Cedex, France
Website: http://www.sb-roscoff.fr/UMR7139/en/genetics.html
==============================================================