Hi, If you could provide us with the list of contigs you think are chloroplastic, we will remove those from the DB. Could you then also make note of that on the wiki? maybe somewhere in the 'assembly problems' section. thanks, lieven Gildas Le Corguille wrote:
Hello,
I'm annotator on the chloroplast genome of Ectocarpus. It's a project beside the nuclear genome. It's seem that some contigs on bogas belong to the chloroplast genome. Then to prevent the double annotation, it may be a good idea to delete those contigs.
We can search for then if you don't know exactly which they are.
Best regards
Gildas Le Corguillé and Catherine Le Blanc _______________________________________________ Beg-bogas mailing list Beg-bogas@psb.ugent.be https://maillist.psb.ugent.be/mailman/listinfo/beg-bogas
-- ============================================================== Lieven Sterck Predoctoral fellow Tel:+32 (0)9 3313821 Fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, UGent Bioinformatics and Evolutionary Genomics Division Technologiepark 927, B-9052 Gent, Belgium Email: lieven.sterck@psb.ugent.be Website: http://bioinformatics.psb.ugent.be -------------------------------------------------------------- Algal Genetics Group UMR 7139 CNRS-UPMC Végétaux Marins et Biomolécules (Marine Plants and Biomolecules) Station Biologique Place Georges Teissier, BP74 29682 Roscoff Cedex, France Website: http://www.sb-roscoff.fr/UMR7139/en/genetics.html ==============================================================