- beg-evodevo@psb.ugent.be - maillist.psb.ugent.be

[Beg-evodevo] PLoS Genetics: Evolution of Stress-Regulated Gene Expression in Duplicate Genes of Arabidopsis thaliana
by Klaas Vandepoele 04 Aug '09

04 Aug '09

http://www.plosgenetics.org/article/info%3Adoi%2F10.1371%2Fjournal.pgen.100… Interferes with some of our future projects (cfr. brainstorm session gene duplicates & expression divergence) -- Klaas Vandepoele, PhD Tel. 32 (0)9 33 13822 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, Belgium E-mail: Klaas.Vandepoele(a)psb.vib-ugent.be Website: http://bioinformatics.psb.ugent.be/ --------------------------------------------------------- Come on out and change the world (around us)

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[Beg-evodevo] PLoS Genetics: Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication
by Yves Van de Peer 12 Jul '09

12 Jul '09

http://www.plosgenetics.org/article/info%3Adoi%2F10.1371%2Fjournal.pgen.100… -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.vib-ugent.be http://bioinformatics.psb.ugent.be/

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[Beg-evodevo] Expression pattern divergence of duplicated genes ...[BMC Bioinformatics. 2009] - PubMed Result
by Yves Van de Peer 28 Jun '09

28 Jun '09

http://www.ncbi.nlm.nih.gov/pubmed/19534757?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.vib-ugent.be http://bioinformatics.psb.ugent.be/

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[Beg-evodevo] Duplication of the Asymmetric Leaves1/Rough Sheath...[Dev Genes Evol. 2009] - PubMed Result
by Yves Van de Peer 28 Jun '09

28 Jun '09

http://www.ncbi.nlm.nih.gov/pubmed/19554349?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.vib-ugent.be http://bioinformatics.psb.ugent.be/

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[Beg-evodevo] Gene duplication and evolutionary novelty in plant...[New Phytol. 2009] - PubMed Result
by Yves Van de Peer 28 Jun '09

28 Jun '09

http://www.ncbi.nlm.nih.gov/pubmed/19555435?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.vib-ugent.be http://bioinformatics.psb.ugent.be/

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[Beg-evodevo] Genomic Footprints of a Cryptic Plastid Endosymbiosis in Diatoms -- Moustafa et al. 324 (5935): 1724 -- Science
by Klaas Vandepoele 26 Jun '09

26 Jun '09

http://www.sciencemag.org/cgi/content/abstract/324/5935/1724 -- Klaas Vandepoele, PhD Tel. 32 (0)9 33 13822 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, Belgium E-mail: Klaas.Vandepoele(a)psb.vib-ugent.be Website: http://bioinformatics.psb.ugent.be/ --------------------------------------------------------- it's hard to keep the animo from driftin' away nowadays

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[Beg-evodevo] Genome sequence comparison of Col and Ler lines reveals the dynamic nature of Arabidopsis chromosomes -- Ziolkowski et al. 37 (10): 3189 -- Nucleic Acids Research
by Klaas Vandepoele 24 Jun '09

24 Jun '09

http://nar.oxfordjournals.org/cgi/content/abstract/37/10/3189 -- Klaas Vandepoele, PhD Tel. 32 (0)9 33 13822 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, Belgium E-mail: Klaas.Vandepoele(a)psb.vib-ugent.be Website: http://bioinformatics.psb.ugent.be/ --------------------------------------------------------- it's hard to keep the animo from driftin' away nowadays

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[Beg-evodevo] Automated identification of conserved synteny after whole genome duplication [GR]
by Klaas Vandepoele 24 Jun '09

24 Jun '09

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[Beg-evodevo] tig 2009: The complex relationship of gene duplication and essentiality
by Tine Blomme 22 Jun '09

22 Jun '09

title: The complex relationship of gene duplication and essentiality by: Takashi Makino, Karsten Hokamp and Aoife McLysaght TRENDS IN GENETICS Volume: 25 Issue: 4 Pages: 152-155 Published: APR 2009 abstract: In yeast and worm, duplicate genes overlap in function so that deleting one of a pair from the genome is less likely to be lethal than deleting a singleton gene. By contrast, previous analyses showed that mouse duplicate genes were as essential as singletons.Weshow that the relationship between gene duplication and essentiality is complex in multicellular organisms, with developmental genes and genes that were duplicated by whole genome duplication being more essential than other duplicated genes. -- ================================================================== Tine Blomme Tel:+32 (0)9 331 38 22 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM tiblo(a)psb.vib-ugent.be http://www.psb.vib-ugent.be ==================================================================

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[Beg-evodevo] The fate of gene duplicates in the genomes of fung...[Commun Integr Biol. 2008] - PubMed Result
by Yves Van de Peer 14 Jun '09

14 Jun '09

http://www.ncbi.nlm.nih.gov/pubmed/19513258?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.vib-ugent.be http://bioinformatics.psb.ugent.be/

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