April 2007 - beg-sysbiol@psb.ugent.be

[Beg-sysbiol] Entrez PubMed
by Yves Van de Peer 29 Apr '07

29 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db…

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[Beg-sysbiol] Entrez PubMed
by Yves Van de Peer 29 Apr '07

29 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db…

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[Beg-sysbiol] Bioframe meeting(s)
by Tom Michoel 20 Apr '07

20 Apr '07

Hi, I don't think all of us have to attend all informal bioframe meetings, as long as we communicate well before and after. So maybe we can sit together for a few minutes today or monday morning to discuss our input for the meeting on monday? Tom -- Tom Michoel <http://www.psb.ugent.be/~tomic/>

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[Beg-sysbiol] [Fwd: Lilly: Why Singapore Is Right for Systems Biology]
by Eric Bonnet 19 Apr '07

19 Apr '07

Let's move to singapore ;-) ?

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[Beg-sysbiol] Reverse engineering cellular networks
by Eric Bonnet 18 Apr '07

18 Apr '07

probably nothing really new (it's about ARACNE), but might be worth reading it... can someone get the pdf? http://www.nature.com/nprot/journal/v1/n2/abs/nprot.2006.106.html

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[Beg-sysbiol] interesting papers of systems biology meeting in Mol Syst Biol
by Vanessa Vermeirssen 18 Apr '07

18 Apr '07

*http://www.nature.com/msb/index.html* *A genome-scale computational study of the interplay between transcriptional regulation and metabolism Meeting highlight* Tomer Shlomi, Yariv Eisenberg, Roded Sharan and Eytan Ruppin 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQha0EK> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhb0EL> *UV-B responsive microRNA genes in /Arabidopsis thaliana/ Meeting highlight* Xuefeng Zhou, Guandong Wang and Weixiong Zhang 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhP0E2> *Inferring condition-specific transcription factor function from DNA binding and gene expression data Meeting highlight* Rachel Patton McCord, Michael F Berger, Anthony A Philippakis and Martha L Bulyk 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhQ0E3> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhR0E4> *Hubs in biological interaction networks exhibit low changes in expression in experimental asthma Meeting highlight* Xin Lu, Vipul V Jain, Patricia W Finn and David L Perkins 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhS0E5> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhT0E6> *Pathway redundancy and protein essentiality revealed in the /Saccharomyces cerevisiae/ interaction networks Meeting highlight* Igor Ulitsky and Ron Shamir 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhU0E7> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhV0E8> *Novel peptide identification from tandem mass spectra using ESTs and sequence database compression Meeting highlight* Nathan J Edwards 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhW0EA> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhX0EB> *Flexibility in energy metabolism supports hypoxia tolerance in /Drosophila/ flight muscle: metabolomic and computational systems analysis Meeting highlight* Jacob D Feala, Laurence Coquin, Andrew D McCulloch and Giovanni Paternostro 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhY0EC> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhZ0ED> -- ================================================================== Vanessa Vermeirssen, PhD VIB DEPARTMENT OF PLANT SYSTEMS BIOLOGY Fax:32 (0)9 3313809 GHENT UNIVERSITY, Technology Park 927, B-9052 Gent, Belgium Vlaams Interuniversitair Instituut voor Biotechnologie VIB mailto:vamei@psb.ugent.be http://www.psb.ugent.be ==================================================================

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[Beg-sysbiol] Entrez PubMed
by Yves Van de Peer 16 Apr '07

16 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db…

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[Beg-sysbiol] FYI
by Steven Maere 16 Apr '07

16 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db… No mention of Segal though... Actually a rather weak review if you ask me. S -- ================================================================== Steven Maere, PhD Dept. of Plant Systems Biology Bioinformatics & Evolutionary Genomics research group Ghent University / VIB Technologiepark 927 B-9052 Gent BELGIUM tel: +32 9 331 3692 fax: +32 9 331 3809 email: stmae(a)psb.UGent.be http://www.psb.UGent.be http://bioinformatics.psb.ugent.be/ ==================================================================

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[Beg-sysbiol] Bayesian methods in bioinformatics and computational systems biology -- Wilkinson, 10.1093/bib/bbm007 -- Briefings in Bioinformatics
by Tom Michoel 16 Apr '07

16 Apr '07

http://bib.oxfordjournals.org/cgi/content/abstract/bbm007v1

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[Beg-sysbiol] Genetic reconstruction of a functional transcriptional regulatory network - Nature Genetics
by Tom Michoel 11 Apr '07

11 Apr '07

http://www.nature.com/ng/journal/vaop/ncurrent/full/ng2012.html

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