Dear all,
After much trouble, I finally succeeded in preprocessing the cell cycle
microarray compendium (I hope nothing went wrong...). We now have an
expression dataset of 19937 genes on 518 experiments (no ratio's). I've
put the stuff in the test_data directory of the segal project (dataset
cc_data, regulator list ath_go_plus_cc_regulators.txt). Enjoy!
Special thanks to Eric, Vanessa and Tine for their help!
Steven
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Steven Maere, PhD
Dept. of Plant Systems Biology
Bioinformatics & Evolutionary Genomics research group
VIB / Ghent University
Technologiepark 927
B-9052 Gent BELGIUM
tel: +32 9 331 3810
fax: +32 9 331 3809
email: stmae(a)psb.UGent.be
http://www.psb.UGent.behttp://bioinformatics.psb.ugent.be/
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Did you see these tools? I just saw a very interesting talk by Olga
Troyanskaya (she's very nice by the way ...) who is doing great work on
integrating yeast data ...
http://function.princeton.edu/software.html
