October 2010 - beg-sysbiol@psb.ugent.be

[Beg-sysbiol] RiboSys, a high-resolution, quantitative approach to measure the in vivo kinetics of pre-mRNA splicing and 3'-end processing in Saccharomyces cerevisiae.
by Pierre Rouze 31 Oct '10

31 Oct '10

http://www.ncbi.nlm.nih.gov/pubmed/20974745?dopt=Abstract This system permits pre-mRNA production, splicing, 3'-end maturation and degradation to be quantitatively monitored with unprecedented kinetic detail, suitable for mathematical modeling. for the ones willing to build a gene expression model that goes beyond transcription ;-) -- Pierre ROUZE Bioinformatics / Senior Expert Scientist VIB Department of Plant Systems Biology Ghent University Technologie park 927, B-9052 GENT BELGIUM Tel :32.933 13694 Cell.Phone : 32.476 638 304 Fax :32.933 13809 pierre.rouze(a)psb.vib-ugent.be http://www.psb.ugent.be/bioinformatics ¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨¨ prediction is very difficult, especially about the future Niels Bohr

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[Beg-sysbiol] Interactional and functional centrality in transcriptional co-expression networks [Bioinformatics]
by Bram Slabbinck 21 Oct '10

21 Oct '10

FYI http://bioinformatics.oxfordjournals.org/content/early/2010/10/19/bioinform… (if you want to print it, take a coffee because it takes more than 5 minutes...) Bram -- ========================================================= Bram Slabbinck, PhD Bioinformatics & Systems Biology VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM Tel:+32 (0)9 33 13 822 Fax:+32 (0)9 33 13 809 Email: Bram.Slabbinck(a)psb.ugent.be WWW: http://bioinformatics.psb.ugent.be =========================================================

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[Beg-sysbiol] Spring printer out of order
by Cedric Simillion 08 Oct '10

08 Oct '10

Dear all, In preparation of this afternoon's IWT session, I wanted to print out Ken's project. Apparently, spring doesn't like Ken's project, because I got an "900.43 Service RIP Software" error on the display. I'm afraid that means that spring will be out of order for a while, if it hasn't gone to meet its maker entirely. Cedric -- ================================================================== Cedric Simillion, PhD Tel:+32 (0)9 331 38 23 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM http://bioinformatics.psb.ugent.be ==================================================================

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[Beg-sysbiol] Abstract | Inferring the conservative causal core of gene regulatory networks
by Klaas Vandepoele 05 Oct '10

05 Oct '10

includes a comparison of some gene regulatory network inference algorithms http://www.biomedcentral.com/1752-0509/4/132/abstract

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