- beg-sysbiol@psb.ugent.be - maillist.psb.ugent.be

[Beg-sysbiol] Gene regulatory network inference: Data integratio...[Biosystems. 2008] - PubMed Result
by Yves Van de Peer 25 Jan '09

25 Jan '09

http://www.ncbi.nlm.nih.gov/pubmed/19150482?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.ugent.be http://bioinformatics.psb.ugent.be/

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[Beg-sysbiol] The evolution of hierarchical gene regulatory networks : Abstract : Nature Reviews Genetics
by Tom Michoel 15 Jan '09

15 Jan '09

http://www.nature.com/nrg/journal/vaop/ncurrent/abs/nrg2499.html

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[Beg-sysbiol] welcome
by Eric Bonnet 13 Jan '09

13 Jan '09

... to Jens Hollunder in the sysbiol mailing list. Jens is now working on the MoneyMaize project that we have with cropdesign, more particularly in the sysbiol workpackage. By the way we are going for a short visit of the psb maize group (greenhouse, lab) next friday around 14h. If anyone is interested to join, you are most welcome (just tell me). Eric

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[Beg-sysbiol] ScienceDirect - Current Opinion in Biotechnology : Gene module level analysis: identification to networks and dynamics
by Tom Michoel 12 Jan '09

12 Jan '09

http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VRV-4TC5H6K-1&_u…

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[Beg-sysbiol] Elastic Nets - LirNets
by Nathalie Pochet 09 Jan '09

09 Jan '09

Hi all, Here you can find Hastie's Elastic Nets paper http://www-stat.stanford.edu/~hastie/Papers/B67.2%20(2005)%20301-320%20Zou%…, which is based on Hastie's and Tibshirani's LASSO and LARS algorithms http://www-stat.stanford.edu/~tibs/lasso.html. LirNets will be the sequel of the Module Networks / Geronemo algorithms, though still in submission. Kind regards, Nathalie

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[Beg-sysbiol] chit chat sysbiol
by Eric Bonnet 09 Jan '09

09 Jan '09

new year, new resolution: we would like to have some "relaxed" sysbiol friday meetings every two weeks to discuss any new ideas, projects, algorithms, conference, paper or whatever. first attempt this afternoon around 14h in the bioinfo meeting room. e.

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[Beg-sysbiol] @home
by Eric Bonnet 07 Jan '09

07 Jan '09

hi there, due to the next-ice-age weather conditions I couldn't start my post-doc-car this morning, so I'll be working at home today. bye-bye e.

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[Beg-sysbiol] [Fwd: [Fwd: [Fwd: Call for papers to the sixth International Workshop on Computational Systems Biology, WCSB 2009]]]
by Yvan Saeys 06 Jan '09

06 Jan '09

-------- Original Message -------- Subject: [Fwd: Call for papers to the sixth International Workshop on Computational Systems Biology, WCSB 2009] Date: Mon, 05 Jan 2009 17:32:25 +0100 From: Stéphane Robin <Stephane.Robin(a)agroparistech.fr> Organization: AgroParisTech / INRA To: ssb <ssb(a)jouy.inra.fr>, statgenome <statgenome(a)agroparistech.fr> -------- Message original -------- Sujet: Call for papers to the sixth International Workshop on Computational Systems Biology, WCSB 2009 Date: Mon, 5 Jan 2009 16:59:54 +0200 (EET) De: Tiina Manninen <tiina.manninen(a)tut.fi> Pour :: undisclosed-recipients: ; Dear Recipient, This is a reminder of WCSB 2009. The abstract deadline is 15th of January. Authors of accepted abstracts submit 4-page papers by 15th of March. See in more details below. ************************************************************* We would like to draw your attention to our upcoming workshop Sixth International Workshop on Computational Systems Biology (WCSB 2009) to be held in Aarhus (Århus), Denmark, June 10 to June 12, 2009. CALL FOR PAPERS See the attached call for papers. WORKSHOP WEB PAGE: http://www.cs.tut.fi/wcsb09/ AIMS AND SCOPE WCSB aims at bringing together the various communities involved in the different aspects of computational systems biology research, e.g. experimental biology, machine learning, signal processing, mathematics, statistics, and theoretical physics. The scientific program includes invited plenary talks as well as regular sessions with contributed research talks and posters. KEYNOTE SPEAKERS Erik De Schutter, Okinawa Institute of Science and Technology, Okinawa, Japan Ilya Shmulevich, Institute for Systems Biology, Seattle, USA Jean-Philippe Vert, Mines ParisTech, Paris, France Stephen Wong, Methodist Hospital Research Institute, Houston, Texas, USA CONFERENCE PROCEEDINGS The speciality of WCSB is that the papers of all accepted talks and posters will be published in a special series of refereed proceedings. Therefore, all prospective authors are first asked to submit a title and abstract (max. 120 words) of their research (see schedule below). Based on the abstracts, the scientific committee will then decide which abstracts will be extended as four page papers in the proceedings. IMPORTANT DATES Submission deadline for abstract: January 15, 2009 Notification of acceptance: January 31, 2009 Submission deadline for paper: March 15, 2009 Submission deadline for camera-ready paper: April 30, 2009 Early bird registration deadline: April 30, 2009 LOCATION AND VENUE With a population of more than 300,000, Aarhus is the second largest city in Denmark, beautifully located between the sea, forests, and hills, on the eastern coast of Jutland, 300 km from Copenhagen. Being the cultural centre of Jutland, Aarhus is termed as an active city displaying Denmark's best music and entertainment scenes. One of the most visited places in Aarhus is Den Gamle By (The Old Town), which is an open-air museum that houses 75 restored buildings. The event will be held at Aarhus University. WORKSHOP EMAIL ADDRESS wcsb09(a)cs.tut.fi On behalf of the WCSB 2009 scientific committee, Tiina Manninen Tampere University of Technology tiina.manninen(a)tut.fi http://www.cs.tut.fi/~manninet -- -------------------------------------------------------------------- Stéphane ROBIN, UMR 518 AgroParisTech / INRA Appl. Math. Comput. Sc. 16 rue Claude Bernard, F-75005 Paris, FRANCE Tel: (33)(0)1.44.08.72.07, Fax: (33) (0)1.44.08.16.66 Personal page: www.agroparistech.fr/-Stephane-Robin-.html UMR 518 AgroParisTech/INRA: www.agroparistech.fr/mia/ SSB group: http://genome.jouy.inra.fr/ssb/ -- Franck Picard - CNRS Laboratoire Biometrie et Biologie Evolutive UCB Lyon 1 - Bât. Grégor Mendel 43 bd du 11 novembre 1918 69622 VILLEURBANNE cedex, France tel : +33 (0)4 72 44 85 44 fax : +33 (0)4 72 43 13 88 http://lbbe.univ-lyon1.fr/-Picard-Franck-.html --~--~---------~--~----~------------~-------~--~----~ Vous avez reçu ce message, car vous êtes abonné au groupe Groupe "baobab-lbbe" de Google Groupes. Pour transmettre des messages à ce groupe, envoyez un e-mail à l'adresse baobab-lbbe(a)googlegroups.com Pour résilier votre abonnement à ce groupe, envoyez un e-mail à l'adresse baobab-lbbe+unsubscribe(a)googlegroups.com Pour afficher d'autres options, visitez ce groupe à l'adresse http://groups.google.com/group/baobab-lbbe?hl=fr -~----------~----~----~----~------~----~------~--~--- -- ================================================================== Dr. Yvan Saeys, PhD DEPARTMENT OF PLANT SYSTEMS BIOLOGY Fax:32 (0)9 331 38 09 BIOINFORMATICS TEAM Tel:32 (0)9 331 36 95 GHENT UNIVERSITY, Technologiepark 927, B-9052 Gent, Belgium Vlaams Instituut voor Biotechnologie VIB mailto:yvan.saeys@ugent.be http://bioinformatics.psb.ugent.be/ http://www.psb.ugent.be/~yvsae/ ================================================================== Ce message entrant est certifié sans virus connu. Analyse effectuée par AVG - http://www.avg.fr Version: 8.0.176 / Base de données virale: 270.10.2/1874 - Date: 04/01/2009 16:32

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[Beg-sysbiol] GeNESiS: gene network evolution simulation softwar...[BMC Bioinformatics. 2008] - PubMed Result
by Yves Van de Peer 22 Dec '08

22 Dec '08

http://www.ncbi.nlm.nih.gov/pubmed/19087333?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.ugent.be http://bioinformatics.psb.ugent.be/

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[Beg-sysbiol] GeneChaser: Identifying all biological and clinica...[BMC Bioinformatics. 2008] - PubMed Result
by Yves Van de Peer 22 Dec '08

22 Dec '08

http://www.ncbi.nlm.nih.gov/pubmed/19094235?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Group Leader Bioinformatics and Evolutionary Genomics VIB Department of Plant Systems Biology, UGent Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.ugent.be http://bioinformatics.psb.ugent.be/

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