- beg-sysbiol@psb.ugent.be - maillist.psb.ugent.be

[Beg-sysbiol] interesting papers of systems biology meeting in Mol Syst Biol
by Vanessa Vermeirssen 18 Apr '07

18 Apr '07

*http://www.nature.com/msb/index.html* *A genome-scale computational study of the interplay between transcriptional regulation and metabolism Meeting highlight* Tomer Shlomi, Yariv Eisenberg, Roded Sharan and Eytan Ruppin 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQha0EK> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhb0EL> *UV-B responsive microRNA genes in /Arabidopsis thaliana/ Meeting highlight* Xuefeng Zhou, Guandong Wang and Weixiong Zhang 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhP0E2> *Inferring condition-specific transcription factor function from DNA binding and gene expression data Meeting highlight* Rachel Patton McCord, Michael F Berger, Anthony A Philippakis and Martha L Bulyk 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhQ0E3> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhR0E4> *Hubs in biological interaction networks exhibit low changes in expression in experimental asthma Meeting highlight* Xin Lu, Vipul V Jain, Patricia W Finn and David L Perkins 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhS0E5> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhT0E6> *Pathway redundancy and protein essentiality revealed in the /Saccharomyces cerevisiae/ interaction networks Meeting highlight* Igor Ulitsky and Ron Shamir 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhU0E7> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhV0E8> *Novel peptide identification from tandem mass spectra using ESTs and sequence database compression Meeting highlight* Nathan J Edwards 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhW0EA> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhX0EB> *Flexibility in energy metabolism supports hypoxia tolerance in /Drosophila/ flight muscle: metabolomic and computational systems analysis Meeting highlight* Jacob D Feala, Laurence Coquin, Andrew D McCulloch and Giovanni Paternostro 17 April 2007 Full Text <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhY0EC> | Supplementary info <http://ealerts.nature.com/cgi-bin24/DM/y/hdZI0SoiRV0Hi60BQhZ0ED> -- ================================================================== Vanessa Vermeirssen, PhD VIB DEPARTMENT OF PLANT SYSTEMS BIOLOGY Fax:32 (0)9 3313809 GHENT UNIVERSITY, Technology Park 927, B-9052 Gent, Belgium Vlaams Interuniversitair Instituut voor Biotechnologie VIB mailto:vamei@psb.ugent.be http://www.psb.ugent.be ==================================================================

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[Beg-sysbiol] Entrez PubMed
by Yves Van de Peer 16 Apr '07

16 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db…

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[Beg-sysbiol] FYI
by Steven Maere 16 Apr '07

16 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db… No mention of Segal though... Actually a rather weak review if you ask me. S -- ================================================================== Steven Maere, PhD Dept. of Plant Systems Biology Bioinformatics & Evolutionary Genomics research group Ghent University / VIB Technologiepark 927 B-9052 Gent BELGIUM tel: +32 9 331 3692 fax: +32 9 331 3809 email: stmae(a)psb.UGent.be http://www.psb.UGent.be http://bioinformatics.psb.ugent.be/ ==================================================================

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[Beg-sysbiol] Bayesian methods in bioinformatics and computational systems biology -- Wilkinson, 10.1093/bib/bbm007 -- Briefings in Bioinformatics
by Tom Michoel 16 Apr '07

16 Apr '07

http://bib.oxfordjournals.org/cgi/content/abstract/bbm007v1

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[Beg-sysbiol] Genetic reconstruction of a functional transcriptional regulatory network - Nature Genetics
by Tom Michoel 11 Apr '07

11 Apr '07

http://www.nature.com/ng/journal/vaop/ncurrent/full/ng2012.html

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[Beg-sysbiol] Entrez PubMed
by Yves Van de Peer 08 Apr '07

08 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db…

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[Beg-sysbiol] Entrez PubMed
by Yves Van de Peer 08 Apr '07

08 Apr '07

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&dopt=Abstract&db…

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[Beg-sysbiol] Algorithms for Molecular Biology | Abstract | 1748-7188-2-2 | Transcriptional regulatory network discovery via multiple method integration: application to e.coli K12
by Yves Van de Peer 06 Apr '07

06 Apr '07

http://www.almob.org/content/2/1/2

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[Beg-sysbiol] [Fwd: Center for Cancer Systems Biology Interactome Map]
by Eric Bonnet 03 Apr '07

03 Apr '07

FYI

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[Beg-sysbiol] (no subject)database
by Vanessa Vermeirssen 16 Mar '07

16 Mar '07

http://www.biomedcentral.com/1471-2105/8/87 GeneBins: a database for classifying gene expression data, with application to plant genome arrays <http://www.biomedcentral.com/1471-2105/8/87> *Goffard N, Weiller G */BMC Bioinformatics/, 2007* 8*:87 -- ================================================================== Vanessa Vermeirssen, PhD VIB DEPARTMENT OF PLANT SYSTEMS BIOLOGY Fax:32 (0)9 3313809 GHENT UNIVERSITY, Technology Park 927, B-9052 Gent, Belgium Vlaams Interuniversitair Instituut voor Biotechnologie VIB mailto:vamei@psb.ugent.be http://www.psb.ugent.be ==================================================================

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