fyi

http://genefriends.org/

GeneFriends is a functional genomics tool aimed at biologists and clinicians. It is based on a gene co-expression map that describes which genes tend to be activated (increase in expression) and deactivated (decrease in expression) simultaneously in a large number of microarray datasets. Because the microarray datasets come from a wide range of conditions, the co-expression map reflects which genes in general tend to be activated simultaneously and are thus under similar transcriptional regulation. This information can be used statistically, using a guilt-by-association approach, to identify and prioritize novel candidate genes involved in biological processes and complex diseases for which a seed list of genes associated with that disease or process is available. It can also be used to gain insights on genes of unknown function by looking at which genes they are co-expressed with.
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Bram Slabbinck, PhD

Bioinformatics & Systems Biology Division
VIB Department of Plant Systems Biology, UGent
Technologiepark 927, 9052 Gent, BELGIUM

Tel:+32 (0)9 33 13 537
Fax:+32 (0)9 33 13 809
Email: Bram.Slabbinck@psb.ugent.be
WWW: http://bioinformatics.psb.ugent.be
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