March 2010 - binari@psb.ugent.be - maillist.psb.ugent.be

[Binari] [Fwd: Clean /group/tmp and /group/tmpannot]
by Lieven Sterck 31 Mar '10

31 Mar '10

these are tmp shares, meaning "temporary". aha ... kdacht van 'temperature' (== hot stuff ;-) ) -------- Original Message -------- Subject: Clean /group/tmp and /group/tmpannot Date: Wed, 31 Mar 2010 10:33:11 +0200 From: Thomas Abeel <thomas(a)abeel.be> To: beg(a)psb.vib-ugent.be Please clean your stuff after you're done, these are tmp shares, meaning "temporary". It shouldn't be there any longer than the time it takes to run the analysis. Currently both shares are over 90% full!! Mostly with stuff from early 2009 or even older, this is not yet another share to fill with junk. Clean after you are done! cheers, Thomas PS: I need some tmp-space soon, when I'm ready to proceed with my analyses I guess I will have to archive some data with "rm -rf *" -- ============================================================== Lieven Sterck, PhD Tel:+32 (0)9 3313821 Fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, UGent Bioinformatics and Evolutionary Genomics Division Technologiepark 927, B-9052 Gent, Belgium Email: lieven.sterck(a)psb.vib-ugent.be Website: http://bioinformatics.psb.ugent.be ============================================================== "You tried your best and you failed miserably. The lesson is: never try!" - H. Simpson

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[Binari] word & images
by Sofie Van Landeghem 30 Mar '10

30 Mar '10

"I am preparing an abstract for your Workshop on Advances in Bio Text Mining. I would need help to produce the right file format, especially inserting an image. Is Words 2007 able to insert correctly images as described in the authors guidelines?" WTF. Sofie -- Sofie Van Landeghem PhD Student VIB Department of Plant Systems Biology, Ghent University Bioinformatics and Evolutionary Genomics Technologiepark 927, 9052 Gent, BELGIUM Tel: +32 (0)9 331 36 95 fax:+32 (0)9 3313809 Website: http://bioinformatics.psb.ugent.be

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[Binari] paper from PNAS
by Sofie Van Landeghem 29 Mar '10

29 Mar '10

I can't seem to get to the full text, anyone? Cheers, Sofie -------- Original Message -------- Subject: [Beg-sysbiol] Revealing strengths and weaknesses of methods for ... [Proc Natl Acad Sci U S A. 2010] - PubMed result Date: Mon, 29 Mar 2010 15:23:13 +0200 From: Yves Van de Peer <yves.vandepeer(a)psb.vib-ugent.be> Reply-To: beg-sysbiol(a)psb.vib-ugent.be To: beg-sysbiol(a)psb.vib-ugent.be, Kathleen Marchal <kathleen.marchal(a)biw.kuleuven.be> http://www.ncbi.nlm.nih.gov/pubmed/20308593?dopt=Abstract -- Yves Van de Peer, PhD. Professor in Bioinformatics and Genome Biology Associate Department Director, VIB Department of Plant Systems Biology Group Leader Bioinformatics and Systems Biology Ghent University Technologiepark 927 B-9052 Ghent Belgium Phone: +32 (0)9 331 3807 Cell Phone: +32 (0)476 560 091 Fax: +32 (0)9 331 3809 email: yves.vandepeer(a)psb.vib-ugent.be http://bioinformatics.psb.ugent.be/ _______________________________________________ Beg-sysbiol mailing list Beg-sysbiol(a)psb.ugent.be https://maillist.psb.ugent.be/mailman/listinfo/beg-sysbiol -- Sofie Van Landeghem PhD Student VIB Department of Plant Systems Biology, Ghent University Bioinformatics and Evolutionary Genomics Technologiepark 927, 9052 Gent, BELGIUM Tel: +32 (0)9 331 36 95 fax:+32 (0)9 3313809 Website: http://bioinformatics.psb.ugent.be

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[Binari] MySQLWTF
by Thomas Van Parys 29 Mar '10

29 Mar '10

mysql> select mn.journal_id, mn.impact_factor, mn.year, `yearcount`.`lastyear` from impact_factors as mn join (select i.journal_id as jjid, max(i.year) as `lastyear` from impact_factors i group by i.journal_id) as `yearcount` on (mn.journal_id = `yearcount`.jjid) where mn.journal_id in (92, 35, 29, 97); +------------+---------------+------+----------------------+ | journal_id | impact_factor | year | lastyear | +------------+---------------+------+----------------------+ | 29 | 7.603 | 2005 | 0008 | | 29 | 7.883 | 2002 | 0008 | | 29 | 7.764 | 2006 | 0008 | | 29 | 8.624 | 2001 | 0008 | | 29 | 7.663 | 2003 | 0008 | | 29 | 10.088 | 1999 | 0008 8 | etc... | 92 | 11.088 | 2005 | 0008 8 | | 92 | 11.295 | 2004 | 0008 5 | | 92 | 10.751 | 2002 | 0008 1 | | 92 | 9.868 | 2006 | 0008 | | 92 | 11.081 | 2001 | 0008 1 | etc... Thanks to Sofie for noticing a corelation between impact_factor and lastyear. Anyone knows how to get me a '2008' in lastyear? T. -- ================================================================== Thomas Van Parys Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM thomas.vanparys(a)psb.vib-ugent.be http://bioinformatics.psb.ugent.be ==================================================================

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[Binari] Zeiss workshop = Free food for us
by Sebastian Proost 26 Mar '10

26 Mar '10

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[Binari] headphone
by Sofie Van Landeghem 22 Mar '10

22 Mar '10

I don't suppose anyone has a spear headphone I can use? :p Sofie -- Sofie Van Landeghem PhD Student VIB Department of Plant Systems Biology, Ghent University Bioinformatics and Evolutionary Genomics Technologiepark 927, 9052 Gent, BELGIUM Tel: +32 (0)9 331 36 95 fax:+32 (0)9 3313809 Website: http://bioinformatics.psb.ugent.be

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[Binari] bestaat lijst nog ?
by Lieven Sterck 18 Mar '10

18 Mar '10

http://www.nieuwsblad.be/article/detail.aspx?articleid=5L2NMGLL&postcode=90… Ugent sup comp ;-) -- ============================================================== Lieven Sterck, PhD Tel:+32 (0)9 3313821 Fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, UGent Bioinformatics and Evolutionary Genomics Division Technologiepark 927, B-9052 Gent, Belgium Email: lieven.sterck(a)psb.vib-ugent.be Website: http://bioinformatics.psb.ugent.be ============================================================== "You tried your best and you failed miserably. The lesson is: never try!" - H. Simpson

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[Binari] i'm back!
by Sofie Van Landeghem 18 Mar '10

18 Mar '10

-- Sofie Van Landeghem PhD Student VIB Department of Plant Systems Biology, Ghent University Bioinformatics and Evolutionary Genomics Technologiepark 927, 9052 Gent, BELGIUM Tel: +32 (0)9 331 36 95 fax:+32 (0)9 3313809 Website: http://bioinformatics.psb.ugent.be

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[Binari] mssql vs mysql
by Kenny Billiau 05 Mar '10

05 Mar '10

Hoi, werkte er ooit al iemand met MS SQL? Blijkbaar wil men hier overschakelen van MySQL naar MS SQL, en ik zoek wat argumenten pro of tegen deze omschakeling. Iemand een idee? of websites? Kenny -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "When we have each other, we have everything" - Douglas P.

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[Binari] [Fwd: ]
by Michiel Van Bel 01 Mar '10

01 Mar '10

http://bioinformatics.psb.ugent.be/research Anybody any idea what Yves is seeing and I'm missing? 'cause I don't see anything that even resembles what Yves is talking about :-/ -- ================================================================== Michiel Van Bel PhD student Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM mibel(a)psb.vib-ugent.be http://www.psb.vib-ugent.be ================================================================== We are all in the gutter, but some of us are looking at the stars.

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