- binari@psb.ugent.be - maillist.psb.ugent.be

[Binari] bagpack
by Kenny Billiau 26 Aug '09

26 Aug '09

Hoi, heeft iemand een bagpack (60L of meer) dat ik zou kunnen lenen voor m'n trip naar de VSA/Canada? Ik heb 'm nodig euhm .. de volledige maand september (1-27). Ik moet er slaapmatjes, 2 slaapzakken en al mijn gereif aan/in kwijt kunnen. Kenny -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "What we feel isn't important. The only question is what we do." -- Rohl

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[Binari] ziet er iemand een zwart lijntje onder het logo?
by Kenny Billiau 26 Aug '09

26 Aug '09

Hierzo: https://intra3.psb.ugent.be/Biocomputing/ -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "What we feel isn't important. The only question is what we do." -- Rohl

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[Binari] perl unit tests .. or kind of
by Kenny Billiau 26 Aug '09

26 Aug '09

Hi, I was trying to find the test suite of an XMLRPC module of perl called Frontier::Responder so I could copy it and tailor it to my own needs. And instead of actually testing the module they .. mimic the behaviour of a testing suite! This is the whole 'testing suite': BEGIN { $| = 1; print "1..1\n"; } END {print "not ok 1\n" unless $loaded;} use Frontier::Client; use Frontier::RPC2; use Frontier::Daemon; $loaded = 1; print "ok 1\n"; The only thing this does is test if the modules can be loaded, and mimic the output of a normal testing suite .. o_O Kenny -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "What we feel isn't important. The only question is what we do." -- Rohl

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[Binari] 8GB sticks
by Kenny Billiau 25 Aug '09

25 Aug '09

Hi, Fnac is selling those of Kingston for 17.5e. They are well hidden on the Wall of Sticks (bottom row, if you're lucky) and at the registers filed under the wrong price. Kenny -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "What we feel isn't important. The only question is what we do." -- Rohl

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[Binari] funny
by Tine Blomme 24 Aug '09

24 Aug '09

http://www.youtube.com/watch?v=Ahg6qcgoay4 Tine °°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°° Tine Blomme Bioinformatics group VIB department of Plant Systems Biology Ghent University Technologiepark 927, B-9052 Zwijnaarde Tel: +32 (0)9 331 38 22

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[Binari] Muinkpark Get Together
by Kenny Billiau 20 Aug '09

20 Aug '09

Hi, abstract: 19h30 MUINKPARK BRING BOOZE BRING GUITAR Article: as the weather still is great and there seems to be no major party going on this week (right? or did I miss something?), we, Seppe and me, have decided to get together this evening around 19h30 at the Muinkpark near 't Zuid. The idea is to cool down with some beer, and to see who can play the most cords in the least amount of time. So, if you've got booze to waste and chords to play, come on over! People without any musical skill are more than welcome too of course. In oddball case the Muinkpark is too crowded and the dumping random people into the pond doesn't fix that problem, we're going to move to 't Zuid park. We will continue to apply previous method to remove to overload of unwanted people. Anyway, drop me a note if you're coming, so we know if we should expect you or not. Please bring your own consumations. Carrefour has a fridge of Jupiler beer near the registers, so getting something cold to drink is not so hard as it seems! Really. Carrefour also has wine, so drop me a note if I have to put their wine into the Jupiler fridge ;) the disorganized committee, Kenny & Seppe ps: as bonus, Michiel already cancelled! -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "What we feel isn't important. The only question is what we do." -- Rohl

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[Binari] diff
by Kenny Billiau 17 Aug '09

17 Aug '09

Hi, anyone any idea how to diff two 13GB files without running out of memory? Apparently gnu diff loads both files into memory and compares :/ I've tried out rdiff from non-gnu, but I don't seem to be able to get it working :/ Any suggestions are welcome. Kenny. -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "What we feel isn't important. The only question is what we do." -- Rohl

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[Binari] Housewarming, a date
by Kenny Billiau 15 Aug '09

15 Aug '09

Hi, I've got two date proposals to give my housewarming, each with it's ad's and dis'. somewhere in the weekend of 22-23: + it's my birthday during that weekend - only one floor of the building will have the party somewhere in the weekend of 29-30: + two floors of partying as most likely my upstairs neighbor will throw her party as well. So it will be a bit more crowded ;) So far I will provide: - some booze: my fridge can only hold 201 beers, but I also have applejenever and some white wine - no champagne: we drank it all on the last house warming ;) - a lot of ricepudding - if my projector lamp ain't broken: you can choose distracting youtube clips all night! Any feedback is appreciated. -Kenny -- ================================================================== Kenny Billiau Web Developer Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM kenny.billiau(a)ugent.be http://bioinformatics.psb.ugent.be ================================================================== "What we feel isn't important. The only question is what we do." -- Rohl

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Re: [Binari] cluster problems of last 2 days
by Michiel Van Bel 14 Aug '09

14 Aug '09

Hall of shame! (not me though, i havent used the cluster in months) Frederik Delaere wrote: > Hi Cluster people, > > As you might have noticed there where cluster problems the last two days. > The partition where the grid engine is installed was full, I cleaned > it up but it was > full again in a couple of hours, which make the complete grid engine > fail, and jobs got lost. > > It took me a while to figure out what went wrong, but I found the > problem: > > somebody submitted a couple of 1000 jobs with a 2 megabyte parameter / > job > > eg: "qsub somejob.pl <insert 2 megabytes of parameters here>" > > grid engine stores all these commands while the jobs are in the queue, > it stores it on > its own partition and not somewhere on a data partition, the partition > went from > 21% usage to 99% usage in a couple of hours. To solve this, the jobs > had to be > changed to read these parameters from a file stored somewhere on the NAS. > > So in the future, tell new people about this, or it will happen again > some day. > > frederik > -- ================================================================== Michiel Van Bel PhD student Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM mibel(a)psb.vib-ugent.be http://www.psb.vib-ugent.be ==================================================================

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[Binari] lab t-shirts
by Tine Blomme 14 Aug '09

14 Aug '09

Hi, In the mail of Nathalie, there is an announcement for a presentation of Prof. Erin O'Shea. I just visited the website of her group, and they have a "fun section", where they present the t-shirts they have made for their group each year. Shouldn't we have that too? http://golgi.harvard.edu/O'Shea/fun_stuff/tshirts/index.html Tine °°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°°° Tine Blomme Bioinformatics group VIB department of Plant Systems Biology Ghent University Technologiepark 927, B-9052 Zwijnaarde Tel: +32 (0)9 331 38 22

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