The guy sitting next to Jens I guess?

It's weird how Jens has his own world .. euhm .. group somehow. He totally skips lunchmeeting presentations and indeed .. fails to introduce new people. ;)

Kenny

On Fri, 7 Aug 2009, Sofie Van Landeghem wrote:

Who the fuck?

Joris Meys wrote:

Dear all,

I'm currently writing my master dissertation under the supervision of

Jens. I read the announcement of FastTree 2 in the mail this week, and it

would greatly help me, as I have to build a few thousand trees in a rather

short time frame. I'm not afraid of figuring out how it works myself, but

if anybody has some tips, they are greatly appreciated.

Thank you in advance

Joris

------------------------------------------------------------------------

Subject:

[Fwd: Other: Software.FastTree 2.0.0 for inferring large]

From:

Yves Van de Peer <yves.vandepeer@psb.vib-ugent.be>

Date:

Sat, 01 Aug 2009 08:52:31 +0200

To:

Bioinformatics & Evolutionary Genomics <beg@psb.ugent.be>

To:

Bioinformatics & Evolutionary Genomics <beg@psb.ugent.be>

-------- Original Message --------

Subject:     Other: Software.FastTree 2.0.0 for inferring large

Date:     Sat, 1 Aug 2009 02:40:28 -0400 (EDT)

From:     evoldir@evol.biology.mcmaster.ca

Reply-To:     brian@helix.biology.mcmaster.ca

To:     yves.vandepeer@psb.ugent.be

We announce FastTree 2, a tool for inferring approximately

maximum-likelihood trees for large alignments.  FastTree is more accurate

than PhyML 3's default settings and 100-1,000 times faster than PhyML or

RAxML. FastTree analyzed an alignment of >200,000 16S ribosomal RNAs in a

day on a desktop computer.

Models: Jukes-Cantor or GTR (nucleotide) or JTT (amino acid)

Rate variation across sites: the CAT approximation (1 rate per site)

Support values: local SH-like supports (or global bootstrap)

FastTree 2 is available at

http://www.microbesonline.org/fasttree/

Morgan N. Price & Paramvir S. Dehal

Physical Biosciences Division

Lawrence Berkeley National Lab

fasttree@microbesonline.org

morgannprice@yahoo.com

--
==================================================================
Kenny Billiau
Web Developer
Tel:+32 (0)9 331 36 95                        fax:+32 (0)9 3313809
VIB Department of Plant Systems Biology, Ghent University
Technologiepark 927, 9052 Gent, BELGIUM
kenny.billiau@ugent.be          http://bioinformatics.psb.ugent.be
==================================================================
 "What we feel isn't important. The only question is what we do."
                                                      -- Rohl
_______________________________________________
Binari Implicitly Neglects All Recursive Iterations
https://maillist.psb.ugent.be/mailman/listinfo/binari