can you mail it again to this address? thaaaaaaaaanx On 06/28/2010 01:05 PM, Frederik Delaere wrote:
I mailed you a map of a hidden treasure
marijn wrote:
presents, you say?
On 06/28/2010 12:58 PM, Kenny Billiau wrote:
I bet he gets loads of presents this way ..
On Mon, 28 Jun 2010, Frederik Delaere wrote:
born the 24th of july 1984 ?
Kenny Billiau wrote:
and don't you just love their very descriptive email address .. ;)
On Mon, 28 Jun 2010, Frederik Delaere wrote:
looks like the average help request mail overhere :)
Michiel Van Bel wrote:
> *sigh* > sometimes I really want to tell those guys to > a) follow a decent english course > b) read the fucking manual > > I mean, it's not that difficult to read your email again before you > send > it, and make sure it makes sense :-( > > > ---------------------------- Original Message > ---------------------------- > Subject: Re:Re: Fw: A PHD student using splice machine > From: ¿µÑ©æ¯<kxj19840724@126.com> > Date: Sun, June 27, 2010 4:14 am > To: "Michiel Van Bel"<michiel.vanbel@psb.vib-ugent.be> > -------------------------------------------------------------------------- > > > > Dear Michiel > Thanks for your help! > I have tried to predict my test file using the software > but the > annotation file can be downloaded,why? > > Best regards! > > Xuejiao > > > > > > > >> ok, >> the software available on the website is only trained for >> Arabidopsis >> and Human. >> So you can only use a test-file (in fasta format). The >> output-format is >> described here: >> http://bioinformatics.psb.ugent.be/webtools/splicemachine/help/ >> >> In order to train splicemachine yourself, you'll have to use the >> offline >> installation (see attachment). >> However, as I didn't write the software, I do not think I can >> really >> help you any further with any questions considering training >> splicemachine yourself. Please have a look at the pdf-files >> included in >> the attachment, for any further instructions. >> >> Michiel >> >> >> >> >> ¿µÑ©æ¯ wrote: >> >> >>> Hi Michieal >>> Thanks for your reply! >>> Here I want to know how to run the software.To the inputing >>> file, how >>> to distinguish the training file and the testing file?or the >>> all the >>> data should be in one file?Then how to distinguish the true or >>> false >>> sites? >>> Thanks a lot! >>> Regards! >>> Xuejiao >>> >>> >>> >>> >>>> Hi Kang, >>>> you can run the splicemachine software at this location: >>>> http://bioinformatics.psb.ugent.be/webtools/splicemachine/ >>>> >>>> Just copy-paste the sequences in fasta format into the >>>> text-field, and >>>> press the "run splicemachine" button. >>>> >>>> kind regards, >>>> Michiel >>>> >>>> >>>> >>>> Yves Van De Peer wrote: >>>> >>>> >>>>> ------------------------------------------------------------------------ >>>>> >>>>> >>>>> *From*: ¿µÑ©æ¯<kxj19840724@126.com> >>>>> *To*: yves.vandepeer@psb.vib-ugent.be >>>>> <yves.vandepeer@psb.vib-ugent.be> >>>>> *Sent*: Fri Jun 25 08:31:52 2010 >>>>> *Subject*: A PHD student using splice machine >>>>> >>>>> Dear Professor >>>>> I'm a PHD student doing research in splice sites >>>>> prediction >>>>> and I have read your article"Splice Machine: predicting splice >>>>> sites >>>>> from high-dimensional local context representations". Now I want >>>>> to do >>>>> some comparisons on NN269 acceptor datasets, but I don't know >>>>> how to >>>>> use the software(how to do prediction). Would you like to tell >>>>> me the >>>>> details? >>>>> Best wishes to you and your family! >>>>> Thanks a lot! >>>>> >>>>> >>>>> Yours sincerely >>>>> Kang xuejiao >>>>> >>>>> >>>>> >>>>> >>>> -- >>>> ================================================================== >>>> >>>> Michiel Van Bel >>>> PhD student >>>> Tel:+32 (0)9 331 36 95 fax:+32 (0)9 >>>> 3313809 >>>> VIB Department of Plant Systems Biology, Ghent University >>>> Technologiepark 927, 9052 Gent, BELGIUM >>>> mibel@psb.vib-ugent.be >>>> >>>> > http://www.psb.vib-ugent.be > > >>>> http://bioinformatics.psb.ugent.be >>>> ================================================================== >>>> >>>> >>>> >>>> >>>> >>> >>> >> -- >> ================================================================== >> Michiel Van Bel >> PhD student >> Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 >> VIB Department of Plant Systems Biology, Ghent University >> Technologiepark 927, 9052 Gent, BELGIUM >> mibel@psb.vib-ugent.be >> http://www.psb.vib-ugent.be >> http://bioinformatics.psb.ugent.be >> ================================================================== >> >> >> >> > > > > ------------------------------------------------------------------------ > > > > Dear Michiel > Thanks for your help! > I have tried to predict my test file using the software > but the > annotation file can be downloaded,why? > > Best regards! > > Xuejiao > > > >> ok, >> the software available on the website is only trained for >> Arabidopsis >> and Human. >> So you can only use a test-file (in fasta format). The >> output-format is >> described here: >> http://bioinformatics.psb.ugent.be/webtools/splicemachine/help/ >> >> In order to train splicemachine yourself, you'll have to use the >> offline >> installation (see attachment). >> However, as I didn't write the software, I do not think I can >> really >> help you any further with any questions considering training >> splicemachine yourself. Please have a look at the pdf-files >> included in >> the attachment, for any further instructions. >> >> Michiel >> >> >> >> >> ¿µÑ©æ¯ wrote: >> >>> Hi Michieal >>> Thanks for your reply! >>> Here I want to know how to run the software.To the inputing >>> file, how >>> to distinguish the training file and the testing file?or the >>> all the >>> data should be in one file?Then how to distinguish the true or >>> false >>> sites? >>> Thanks a lot! >>> Regards! >>> Xuejiao >>> >>> >>> >>>> Hi Kang, >>>> you can run the splicemachine software at this location: >>>> http://bioinformatics.psb.ugent.be/webtools/splicemachine/ >>>> >>>> Just copy-paste the sequences in fasta format into the >>>> text-field, and >>>> press the "run splicemachine" button. >>>> >>>> kind regards, >>>> Michiel >>>> >>>> >>>> >>>> Yves Van De Peer wrote: >>>> >>>>> ------------------------------------------------------------------------ >>>>> >>>>> >>>>> *From*: ¿µÑ©æ¯<kxj19840724@126.com> >>>>> *To*: yves.vandepeer@psb.vib-ugent.be >>>>> <yves.vandepeer@psb.vib-ugent.be> >>>>> *Sent*: Fri Jun 25 08:31:52 2010 >>>>> *Subject*: A PHD student using splice machine >>>>> >>>>> Dear Professor >>>>> I'm a PHD student doing research in splice sites >>>>> prediction >>>>> and I have read your article"Splice Machine: predicting splice >>>>> sites >>>>> from high-dimensional local context representations". Now I want >>>>> to do >>>>> some comparisons on NN269 acceptor datasets, but I don't know >>>>> how to >>>>> use the software(how to do prediction). Would you like to tell >>>>> me the >>>>> details? >>>>> Best wishes to you and your family! >>>>> Thanks a lot! >>>>> >>>>> >>>>> Yours sincerely >>>>> Kang xuejiao >>>>> >>>>> >>>>> >>>> >>>> -- >>>> ================================================================== >>>> >>>> Michiel Van Bel >>>> PhD student >>>> Tel:+32 (0)9 331 36 95 fax:+32 (0)9 >>>> 3313809 >>>> VIB Department of Plant Systems Biology, Ghent University >>>> Technologiepark 927, 9052 Gent, BELGIUM >>>> mibel@psb.vib-ugent.be >>>> http://www.psb.vib-ugent.be >>>> http://bioinformatics.psb.ugent.be >>>> ================================================================== >>>> >>>> >>>> >>>> >>> >>> >>> >> >> -- >> ================================================================== >> Michiel Van Bel >> PhD student >> Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 >> VIB Department of Plant Systems Biology, Ghent University >> Technologiepark 927, 9052 Gent, BELGIUM >> mibel@psb.vib-ugent.be >> http://www.psb.vib-ugent.be >> http://bioinformatics.psb.ugent.be >> ================================================================== >> >> >> > > > ------------------------------------------------------------------------ > > > > _______________________________________________ > Binari Implicitly Neglects All Recursive Iterations > https://maillist.psb.ugent.be/mailman/listinfo/binari > >
-- ====================================================================== Kenny Billiau Bioinformatics Group / GoFORSYS Scientific Programmer +49 331 567 8626 billiau@mpimp-golm.mpg.de Max Planck Institute for Molecular Plant Physiology Am Mühlenberg 1, 14476 Potsdam-Golm, Germany http://bioinformatics.mpimp-golm.mpg.de http://www.goforsys.de ====================================================================== ------------------------------------------------------------------------
_______________________________________________ Binari Implicitly Neglects All Recursive Iterations https://maillist.psb.ugent.be/mailman/listinfo/binari
-- ================================================================== Frederik Delaere
Tel:+32 (0)9 331 38 14 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM frlae@psb.vib-ugent.be http://www.psb.vib-ugent.be ==================================================================
_______________________________________________ Binari Implicitly Neglects All Recursive Iterations https://maillist.psb.ugent.be/mailman/listinfo/binari
-- ====================================================================== Kenny Billiau Bioinformatics Group / GoFORSYS Scientific Programmer +49 331 567 8626 billiau@mpimp-golm.mpg.de Max Planck Institute for Molecular Plant Physiology Am Mühlenberg 1, 14476 Potsdam-Golm, Germany http://bioinformatics.mpimp-golm.mpg.de http://www.goforsys.de ======================================================================
_______________________________________________ Binari Implicitly Neglects All Recursive Iterations https://maillist.psb.ugent.be/mailman/listinfo/binari
------------------------------------------------------------------------
_______________________________________________ Binari Implicitly Neglects All Recursive Iterations https://maillist.psb.ugent.be/mailman/listinfo/binari
-- ================================================================== Marijn Vandevoorde Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM marijn.vandevoorde@psb.vib-ugent.be http://www.psb.vib-ugent.be ================================================================== "Fat bottomed girls, you make the rockin' world go round." --F. Mercury