Op 18-08-10 13:28, Thomas Abeel schreef:
On 18/08/2010 13:27, Thomas Van Parys wrote:
I'm testing my LeMoNe viewer on vampire as well as on my own pc...
Weird observation: Running the viewer on my own pc takes about 35". Doing the very same thing on vampire keeps the bits flowing for over 2'20".
The data is located on my home share, so both vampire as my machine have to fetch it there. Both are running a 64bit JVM.
So... is vampire that slow? Is my pc that fast? Or is the network connection between vampire and the home share the bad?
In my opinion virtualization is the culprit, will make everything slower.
Benchmarking. Tried it a few times. Give or take 10s, you get the same results every run (I've been using vampire for a week with the same script, so I thought over 2min was normal). hunapu (my pc): 31" midas : 47" tornado : 57" vampire : 2' 47" As cpuinfo claims more and better cpu's in vampire... de virtualization is slowing down things 3 to 5 times. T. -- ================================================================== Thomas Van Parys Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM thomas.vanparys@psb.vib-ugent.be http://bioinformatics.psb.ugent.be ==================================================================