- beg-bogas@psb.ugent.be - maillist.psb.ugent.be

Re: [Beg-bogas] [BOGAS] #99: browsing from one contig to the other
by BOGAS 08 Feb '10

08 Feb '10

#99: browsing from one contig to the other --------------------------+------------------------------------------------- Reporter: strom | Owner: kebil Type: enhancement | Status: closed Priority: critical | Milestone: Component: Website | Version: Resolution: fixed | Keywords: --------------------------+------------------------------------------------- Changes (by liste): * status: new => closed * resolution: => fixed Comment: fixed commit 918. better intro page per genome available. offering all loci on intro page is too heavy, therefore go through search to list all the genes (shows also the status and user...). the only page that 'lists' all contigs is the create new locus page. all other requests better go through the search function -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/99#comment:1> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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Re: [Beg-bogas] [BOGAS] #3: overview of loci
by BOGAS 08 Feb '10

08 Feb '10

#3: overview of loci ------------------------------------------------+--------------------------- Reporter: thabe <thomas.abeel@…> | Owner: liste Type: enhancement | Status: closed Priority: minor | Milestone: Component: Website | Version: development Resolution: fixed | Keywords: ------------------------------------------------+--------------------------- Changes (by liste): * status: new => closed * resolution: => fixed Comment: fixed commit 918. better intro page per genome available. offering all loci on intro page is too heavy, therefore go through search to list all the genes (shows also the status and user...) -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/3#comment:5> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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Re: [Beg-bogas] [BOGAS] #79: BOGAS entry page
by BOGAS 08 Feb '10

08 Feb '10

#79: BOGAS entry page --------------------------+------------------------------------------------- Reporter: liste | Owner: kebil Type: enhancement | Status: closed Priority: minor | Milestone: Component: Website | Version: development Resolution: fixed | Keywords: --------------------------+------------------------------------------------- Changes (by liste): * status: new => closed * resolution: => fixed Comment: Fixed commit 917. now auto-listing of genomes based on the info in config table. -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/79#comment:1> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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Re: [Beg-bogas] [BOGAS] #133: alternative models
by BOGAS 04 Feb '10

04 Feb '10

#133: alternative models --------------------------+------------------------------------------------- Reporter: liste | Owner: kebil Type: enhancement | Status: closed Priority: major | Milestone: Component: Website | Version: Resolution: fixed | Keywords: --------------------------+------------------------------------------------- Changes (by liste): * status: new => closed * resolution: => fixed Comment: fixed in commit: 913 alternative models now shown on gene page, need to still double check for the naming (=> if you add an alt model) and that alt models do not become obsolete on modification -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/133#comment:1> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] [BOGAS] #149: EMBL GV/art services
by BOGAS 04 Feb '10

04 Feb '10

#149: EMBL GV/art services ------------------------------+--------------------------------------------- Reporter: liste | Owner: thabe Type: enhancement | Status: new Priority: minor | Milestone: Component: ArteminiServices | Version: Keywords: | ------------------------------+--------------------------------------------- beter to move some functions to shared modules for both services (GV & art). than need to only develop/debug one file. -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/149> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation Service

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[Beg-bogas] [BOGAS] #148: layout diff pages
by BOGAS 04 Feb '10

04 Feb '10

#148: layout diff pages -------------------------+-------------------------------------------------- Reporter: liste | Owner: kebil Type: enhancement | Status: new Priority: minor | Milestone: Component: Website | Version: Keywords: | -------------------------+-------------------------------------------------- work on the layout of the compare versions pages. now they are bit to 'blunt'. cfr wiki or docuwiki -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/148> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation System

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[Beg-bogas] update error Tetur17g4711
by Lieven Sterck 03 Feb '10

03 Feb '10

2010/02/03 03:55:48 An error occured while updating Tetur17g4711 from Tetur!! Error message below: No data for Tetur17g4711, from Tetur, 666666!!

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Re: [Beg-bogas] [BOGAS] #144: modif in GV/artemini but no submit on website (or earlier )
by BOGAS 02 Feb '10

02 Feb '10

#144: modif in GV/artemini but no submit on website (or earlier ) -------------------------------+-------------------------------------------- Reporter: liste | Owner: thabe Type: defect | Status: closed Priority: major | Milestone: Component: ArteminiServices | Version: Resolution: fixed | Keywords: -------------------------------+-------------------------------------------- Changes (by liste): * status: new => closed * resolution: => fixed Comment: fixed commit 911 . if user closes window without submit => alert window opens to notify him. (no pop up if submit is clicked) -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/144#comment:1> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation System

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[Beg-bogas] [BOGAS] #146: test
by BOGAS 02 Feb '10

02 Feb '10

#146: test -----------------------+---------------------------------------------------- Reporter: anonymous | Owner: liste Type: defect | Status: new Priority: major | Milestone: Component: AlignView | Version: Keywords: | -----------------------+---------------------------------------------------- bla -- Ticket URL: <http://psbsvn01/trac/BOGAS/ticket/146> BOGAS <http://bioinformatics.psb.ugent.be/webtools/bogas> Bioinformatics Online Genome Annotation System

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[Beg-bogas] update error Connection
by liste＠psb.vib-ugent.be 28 Jan '10

28 Jan '10

2010/01/28 10:24:41 An error occured connecting to the database server Error message below: DBD::mysql::st execute failed: MySQL server has gone away at CheckAndStartBOGASupdate_dev.pl line 65.

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