- beg-bogas@psb.ugent.be - maillist.psb.ugent.be

Re: [Beg-bogas] BOGAS - Account Upgrade (Tetranychus evansi)
by JAN-ADRIANUS VEENSTRA 26 Sep '12

26 Sep '12

Thanks Stephane Jan

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[Beg-bogas] name converter
by Ana-Rosa Ballester 06 Sep '12

06 Sep '12

Good afternoon, I am AnaRosa Ballester and I am using the blast search against Malus domestica genome implemented in your webpage. Do you have a file to convert or combining both Gene ID locus (as MD04G011060.1) and the alternative name (as MDP0000642594) for the whole genome? Because I would like to have both annotations in my own flies. Thanks in advance, AnaRosa Ballester -- ----------------------------------------------------------------------------------- Ana-Rosa Ballester Instituto de Agroquímica y Tecnología de Alimentos Grupo Fisiología y Biotecnología de Postcosecha / Dpto. Ciencia de los Alimentos Avda. Agustín Escardino 7, 46980 Paterna (Valencia) Spain Telf. +34 963900022 ext. 2026 e-mail: ballesterar(a)iata.csic.es -----------------------------------------------------------------------------------

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[Beg-bogas] Permission
by Hormoz Noormohamadian 02 Sep '12

02 Sep '12

To whom it may concern, My name is Hormoz Noormohammadian and I am master student in biotechnology at Chalmers University of Technology in Sweden. I am writing to you to ask for publishing permission of a Pichia pastoris image, which you published online, in my master thesis. The image is reachable via following link: http://bioinformatics.psb.ugent.be/webtools/bogas/overview/Picpa Best wishes hormoz

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[Beg-bogas] free gift..
by hi 07 Aug '12

07 Aug '12

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[Beg-bogas] start update routine (message to genome admins)
by Lieven Sterck 03 Aug '12

03 Aug '12

dear all, since today I improved the checkandstart update script of BOGAS/ORCAE from now on it's not needed anymore to manually add your genome in that script, he will check to list of genomes (once a day) from the bogas config file ! still one drawback, he is reading the file that is in my SVN ... but unfortunately I don't have a neat and easy solution for that currently :-/ ays, L. -- ============================================================== Lieven Sterck, PhD Tel:+32 (0)9 3313821 Fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, UGent Bioinformatics and Evolutionary Genomics Division Technologiepark 927, B-9052 Gent, Belgium Email: lieven.sterck(a)psb.vib-ugent.be Website: http://bioinformatics.psb.ugent.be ============================================================== "Facts are meaningless. You could use facts to prove anything that's even remotely true" - H. Simpson

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[Beg-bogas] [SPAM] Verify this email address
by Zimbra 01 Aug '12

01 Aug '12

Zimbra Account Warning This mail is from Zimbra Administrator we wish to bring to your notice the Condition of your email account. We have just noticed that you have exceeded your email Database limit of 500 MB quota and your email IP is causing conflict because it is been accessed in different server location. You need to Upgrade and expand your Zimbra quota limit before you can continue to use your email. Update your email quota limit to 2.6 GB, use the below web link: https://docs.google.com/spreadsheet/viewform?formkey=dDNQVFhjUWV6WGFFNDQzT2… and login your full email address. Example joe(a)yourdomain.com and password Failure to do this will result to email deactivation within 24hours Thank you for your understanding. Copyright ©2012 Zimbra Help Desk Technical Support Centre.

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Re: [Beg-bogas] BOGAS - Geotrichum candidum Annotation
by Sandrine Mallet 30 Jul '12

30 Jul '12

dear Madam/Sir, I juste would like to inform you that "Genomeview" doesn't work this day. thank tou very much for your help Best regards Sandrine Le 05/07/2012 15:46, beg-bogas(a)psb.vib-ugent.be a écrit : > Dear Madam/Sir, > > you are invited to participate in the annotation effort for the genome > of Geotrichum candidum. > Please follow the link provided below to register yourself. > > http://bioinformatics.psb.ugent.be/webtools/bogas/users/invitationcode/cc71… > > > In case the above link does not work: go to _url and enter > cc715147427ea498bc8949893352b5de > > By doing you so you will be granted access to the restricted website > where you are able to modify the gene annotations. > > > thank you, > the BOGAS-team. > > > >

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[Beg-bogas] update error Connection
by liste＠psb.vib-ugent.be 30 Jul '12

30 Jul '12

2012/07/30 14:04:09 An error occured connecting to the database server Error message below: Can't locate object method "new" via package "Algorithm::Diff" at /software/shared/apps/x86_64/perl/5.10.1/lib/site_perl/5.10.1/Array/Diff.pm line 75.

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[Beg-bogas] update error Connection
by liste＠psb.vib-ugent.be 27 Jul '12

27 Jul '12

2012/07/27 15:27:42 An error occured connecting to the database server Error message below: DBI connect('bogas_eugrav2:psbsql04:3306','bogas',...) failed: Can't connect to MySQL server on 'psbsql04' (113) at modules/BOGAS/DB.pm line 260

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[Beg-bogas] update error Connection
by liste＠psb.vib-ugent.be 27 Jul '12

27 Jul '12

2012/07/27 15:27:08 An error occured connecting to the database server Error message below: DBI connect('bogas_trpee:psbsql04:3306','bogas',...) failed: Can't connect to MySQL server on 'psbsql04' (113) at modules/BOGAS/DB.pm line 260

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