[BBC] Course Small molecules, gene products and their interaction, 1-5 July 2013, Maastricht, the Netherlands
Celia van Gelder
C.vanGelder at cmbi.ru.nl
Fri May 17 13:13:00 CEST 2013
Small molecules, gene products and their interaction
EBI Roadshow, Pathway-Network course and DiXa Training Course
General information
Date:July 1- 5, 2013
Location:Maastricht, the Netherlands
Website:http://www.nbic.nl/education/course-overview/pages3/1/coursedetails/small-molecules-gene-products-and-their-interaction/
Organisers:Chris Evelo (Maastricht University), Egon Willighagen
(Maastricht University), Tom Hancocks (EMBL-EBI), Vera Matser (EMBL-EBI
& DiXa), Celia van Gelder (NBIC)
Registration:http://www.nbic.nl/education/nbic-phd-school/enrolment/
Contact:Celia van Gelder (NBIC), education at nbic.nl
<mailto:education at nbic.nl>
Course description
This five day course introduces various databases and data
analysis tools to get grips on the big data in the life sciences.
The course consists of two parts:
Part 1 (day 1-3) introduces the advanced uses of the gene and
genomes databases, small molecule resources, the protein sequence
databases, and interaction and pathway databases at EBI (a.o.
UniPROT, ENSEMBL, CHEMBL, IntAct and Reactome).
This first part is an EBIRoadshow hosted by UM & NBIC.
The second part (day 4-5) focuses on real data analysis using
pathway and network approaches with links to the databases covered
in first part.
Tools that will be used include WikiPathways, PathVisio and
Cytoscape. Covered aspects include pathway creation, data
preparation for analysis, pathway analysis. network analysis and
network extension using target information.
This second part is provided by the department of
Bioinformatics-BiGCaT at Maastricht University in collaboration
with the DiXa FP7 project (www.dixa-fp7.eu) on systems biology
approaches in toxicogenomics.
The DiXa project will provide examples about (re)use and
(re)analysis of large genomics datasets.
*Teachers*
Denise Carvalho-Silva, Louisa Bellis, Sandra Orchard, Chris Evelo,
Martina Kutmon, Christoper Hardt, Stathis Kanterakis, Anwesha Dutta,
Egon Willighagen.
*Target audience
*This course is intended for researchers in Life Sciences,
Bioinformatics and Systems Biology, Pharmacology, Toxicology.
*Course Programme*
See http://www.nbic.nl/uploads/media/Programme_Maastricht.pdf
--
Dr. Celia W.G. van Gelder
Coordinator Education CMBI
Projectleader Education NBIC
tel. +31-(0)24-3666120
e-mail:C.vanGelder at cmbi.ru.nl
websites:www.cmbi.ru.nl,www.nbic.nl
Postal address:
CMBI 260
Radboud University Nijmegen-Medical Centre /NCMLS
PO Box 9101, 6500 HB Nijmegen
The Netherlands
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