April 2023 - BBClist - maillist.psb.ugent.be

Upcoming abstract deadline (2023/04/20) CompMS @ ISMB/ECCB 2023 (Lyon 2023/07/23-27)
by BeNeLux bioinformaticians forum 14 Apr '23

14 Apr '23

— ISMB/ECCB 2023 CompMS – Abstract submission deadline (April 20, 2023) — [https://lh5.googleusercontent.com/suRJkgolNypaKoTlcOj6dOHEG4VxsBk9gPLJaiXly…] Dear colleague, We would like to remind you that the abstract submission deadline for the Computational Mass Spectrometry (CompMS) session at the ISMB/ECCB 2023 conference is April 20, 2023. We encourage you to submit your abstract today and join us during the ISMB/ECCB 2023 conference in Lyon, France or virtually on July 23–27, 2023. Combining the annual Intelligent Systems for Molecular Biology (ISMB) and the European Conference on Computational Biology (ECCB), this is the world's largest bioinformatics/computational biology conference. Every year it brings together scientists from computer science, molecular biology, mathematics, statistics, and related fields and provides an intense multidisciplinary forum for disseminating the latest developments in bioinformatics/computational biology. The conference fosters fresh dialogues, collaboration and learning opportunities, and is a gathering which shapes the future of the field. At the heart of the scientific program are ISCB’s Communities of Special Interest (COSIs), enabling community involvement and bolstering ISMB’s reputation as the leading conference in the field. The CompMS COSI promotes the efficient, high-quality analysis of mass spectrometry data through dissemination and training in existing approaches and discussion of new, innovative approaches. The CompMS initiative aims to exploit synergies between different mass spectrometry-based application domains, in particular proteomics, metabolomics, and lipidomics. Date: July 27, 2023 (CompMS COSI) / July 23–27, 2023 (ISMB/ECCB) Venue: Centre de Congrès de Lyon, Lyon, France / virtual Website: https://www.iscb.org/ismbeccb2023 Key dates April 20, 2023: Abstract submission deadline May 11, 2023: Talk/poster acceptance notifications May 18, 2023: Late poster submission deadline May 25, 2023: Late poster acceptance notifications July 23–27, 2023: ISMB/ECCB conference Keynote speakers We are excited to announce that the CompMS session will feature keynote presentations from the following leaders in the computational mass spectrometry field: * Dr. Laura Goracci, University of Perugia, Italy * Dr. Tomáš Pluskal, Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Czech Republic * Dr. Bernhard Renard, Hasso-Plattner-Institut, Germany Abstract submission deadline The abstract submission deadline for ISMB/ECCB 2023 is fast approaching! Submit your abstract to ISMB/ECCB to present your work at the leading bioinformatics/computational biology conference. Attend the CompMS session to learn about the latest algorithmic advances in computational mass spectrometry. Please remember to select the CompMS COSI as your session of interest upon submitting your abstract. Call for abstracts: https://www.iscb.org/ismbeccb2023-submissions/abstracts We look forward to seeing you at ISMB/ECCB! The CompMS organizing committee. Wout Bittremieux Isabell Bludau Lindsay Pino Timo Sachsenberg

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PhD fellowship Marie Sklodowska-Curie program in Spain. Deadline approaching
by BeNeLux bioinformaticians forum 12 Apr '23

12 Apr '23

Dear colleagues, We are looking for PhD candidates through the 3-i ICT Marie Sklodowska-Curie program to work on Integration of multi-omic data for the discovery of novel cancer biomarkers. Supervisors: Dr. Carlos Fernandez-Lozano. Associate Professor. University of A Coruña Dr. Jose A. Seoane. Head of the Cancer Computational Biology Group. Vall d'Hebron Institute of Oncology (Barcelona) Application deadline: 20th April 2023. 23:59h (CET) Apply here <https://3i-ict.citic.udc.es/?page_id=98> Remember to select ?2023-C2-012. Integration of multi-omic data for the discovery of novel cancer biomarkers: A proteogenomics approach? in the drop menu. Euraxess general offer here <https://euraxess.ec.europa.eu/jobs/hosting/2nd-call-3-i-ict-phd-h2020-msca-…> Could you please forward this to any interested student you may know? Please, the candidate should check mobility eligibility conditions before applying. Carlos Fernandez-Lozano, PhD Department of Computer Science and Information Technologies Associate Professor - Universidade da Coruña Affiliated Researcher - Centre for Information and Communications Technology Research Phone number: +34 881 01 6013<callto:+34%20881%2001%206013> ORCID-ID: 0000-0003-0413-5677<http://orcid.org/0000-0003-0413-5677> SCOPUS-ID: <https://www.scopus.com/authid/detail.uri?authorId=55062924200> 55062924200<https://www.scopus.com/authid/detail.uri?authorId=55062924200> [cid:c6d9d55d-8396-4a99-96af-5eff76a96db1]<https://www.citic.udc.es>[cid:bdd863da-9828-43cd-9335-949080590737]<https://www.udc.gal>[cid:9a19e0d0-859a-454b-b03e-c5d7b489333f]

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Fwd: [CECI-users] Offre d'emploi: Logisticien.ne de Recherche (Administration Système HPC) pour le CÉCI
by BeNeLux bioinformaticians forum 05 Apr '23

05 Apr '23

Dear colleagues, please find below a job offer for an HPC Sysadmin within the CECI clusters. Could you please forward within your networks? Thanks in advance! Best Leonor -- Leonor Palmeira | PhD Bioinformatics Project Manager Department of Human Genetics Bat. 34 +1 (route 665) CHU de Liège | Domaine Universitaire du Sart-Tilman 4000 Liège | BELGIQUE e-mail: lpalmeira(a)chuliege.be Tél: +32-4-366.91.41 Fax: +32-4-366.72.61 LifeSize: https://call.lifesizecloud.com/1773506 Please use gnt.bif(a)chuliege.be to reach our bioinformatics team. BIF Meeting room: https://call.lifesizecloud.com/2189874 (code: 967139) ----- Mail transféré ----- De: "David Colignon" <David.Colignon(a)uliege.be> À: CECI-PI(a)lists.ulg.ac.be, CECI-users(a)lists.ulg.ac.be Envoyé: Mercredi 5 Avril 2023 09:26:14 Objet: [CECI-users] Offre d'emploi: Logisticien.ne de Recherche (Administration Système HPC) pour le CÉCI Cher.e.s collègues, Le CÉCI ( [ https://www.ceci-hpc.be/ | https://www.ceci-hpc.be/ ] ) recrute un.e Logisticien.ne de Recherche (Administration Système HPC). La description détaillée du poste est disponible ici : [ http://www.ceci-hpc.be/assets/pdf/Offre_Emploi_Logisticien_CECI_Mars_2023.p… | http://www.ceci-hpc.be/assets/pdf/Offre_Emploi_Logisticien_CECI_Mars_2023.p… ] Pouvez-vous diffuser largement cette annonce ? Merci, David Colignon -- David Colignon, Ph.D. Logisticien de Recherche Principal Applied & Computational Electromagnetics Montefiore B28, Allée de la découverte 10, 4000 Liège [ http://www.campus.uliege.be/nic5 | http://www.campus.uliege.be/nic5 ] _______________________________________________ CECI-users mailing list CECI-users(a)lists.uliege.be https://lists.uliege.be/mailman/listinfo/ceci-users

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Upcoming BioSB courses!
by BeNeLux bioinformaticians forum 04 Apr '23

04 Apr '23

Dear colleagues, A number of interesting courses from the BioSB Research school are scheduled in the coming months. Please note that two courses still have an early bird rate, so register in time! Knowledge Graphs in the Life Sciences 13 - 17 March, Wageningen NOTE: there are only a few spots still available The first part of the course introduces you to the knowledge, theory, and skills needed to work with Linked Data. We will then focus on research and industrial data applications and needs that are increasingly in demand. The course is aimed at PhD students with a background in biology, computer science or a related field, and life sciences. Participants from the private sector are also welcome. Preparation material will be distributed dug the course. **************************************************** More information about the course can be found here<https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.dtls.…> Registration can be done here<https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.aanme…> **************************************************** Molecular Epidemiology of Complex Diseases 12 - 16 June, Maastricht NOTE: deadline early bird rate = 16 April 2023 This course aims to facilitate the acquisition of the essentials of molecular epidemiology: combining information from molecular biomarkers as obtained through omics technologies, with lifestyle and environmental factors, to understand disease occurrence and prognosis in population-based studies. The audience targeted is two-fold, firstly PhD students, postdoctoral fellows, PIs, and all other researchers/R&D staff working in bioinformatics and systems biology, who want to extend, update or refresh their knowledge on this dynamic domain. Secondly, we also invite participants with a(n original) background in epidemiology, biology, biomedical sciences, medicine, statistics, and related fields, who want to become acquainted with this expanding research area. **************************************************** More information about the course can be found here<https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.dtls.…> Registration can be done here<https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.aanme…> **************************************************** Algorithms for Biomolecular Networks 26 - 30 June, Wageningen NOTE: deadline early bird rate = 30 April 2023 In this course, we will first give a brief overview of molecular biology, the advent of high-throughput measurement techniques and large databases containing biological knowledge, and the importance of networks to model all this. Next, we will discuss variing network models Building on the network inference methods, a number of ways of integrating various data sources and databases to refine biological networks will be discussed. The course is aimed at PhD students with a background in bioinformatics, computer science or a related field; a working knowledge of basic statistics and linear algebra is assumed. **************************************************** More information about the course can be found here<https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.dtls.…> Registration can be done here<https://eur04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.aanme…> **************************************************** We hope to welcome you to one of our courses! Kind regards, Petra Aarnoutse Community manager BioSB research school

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Senior Data Scientist - Hit Discovery at AstraZeneca (Cambridge, UK)
by BeNeLux bioinformaticians forum 03 Apr '23

03 Apr '23

Hi all, I hope this finds you well. We have a new opening in the Data Sciences and Quantitative Biology department at AstraZeneca (Cambridge, UK). The successful candidate will provide computational analysis and statistical solutions to enable and enhance the output from our hit discovery platforms to drive drug discovery efforts in close collaboration with laboratory and automation scientists. If you know of anyone looking for a new career opportunity or reaching his/her end-of-contract, please share this. The deadline for applications is *April 19th.* https://astrazeneca.wd3.myworkdayjobs.com/Careers/job/UK---Cambridge/Senior… Thanks, Sergio --- Sergio Martinez Cuesta Associate Director in Bioinformatics Discovery Sciences, AstraZeneca R&D Cambridge, UK

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