February 2025 - BBClist - maillist.psb.ugent.be

nf-core hackathon - Amsterdam site!
by BeNeLux bioinformaticians forum 03 Feb '25

03 Feb '25

Hi everyone, My name is Rayan, and I am part of the Data Team (Joep de Ligt’s team) at the Hartwig Medical Foundation in Amsterdam. >From March 24th to 26th, in collaboration with Google, we will be hosting a local site in Amsterdam at the Google offices for the March edition of the nf-core hackathon! This event is open to everyone who wants to get together in an informal setting work on Nextflow and nf-core related things. Interested? Here’s the registration information https://nf-co.re/events/2025/hackathon-march-2025 Spread the news: https://shorturl.at/DTlpI I hope you can join us! With kind regards, Rayan Hassaïne, MSc Bioinformatician, Data Team [Hartwig Medical Foundation] [signature_129242794]<http://www.ccg2025.eu/> A Science Park 408, 1098 XH Amsterdam T +31 (0)20 226 9700<tel:+31202269700> | +31 (0)6 2391 4885<tel:+31623914885> W hartwigmedicalfoundation.nl<https://www.hartwigmedicalfoundation.nl/> | oncoact.nl<https://oncoact.nl/> N Subscribe to our newsletter<https://mailchi.mp/475bfde5c6f3/nieuwsbrieven-hartwig-medical-foundation> [LinkedIn][Instagram][YouTube][Facebook] It is our mission to realize that every cancer patient with metastatic cancer receives a personalized treatment using a complete DNA test

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Master RNA-Seq & Single-Cell RNA-Seq Data Analysis – In-Person & Online Courses
by BeNeLux bioinformaticians forum 03 Feb '25

03 Feb '25

Dear all, Are you working with RNA-Seq or Single-Cell RNA-Seq data? Gain the skills and confidence to analyse your transcriptomics datasets with our expert-led training courses at Edinburgh Genomics. We offer both in-person and onlineoptions to suit your needs. 🔬 RNA-Seq Data Analysis 📍 In-Person: 17–20 February 2025 (Details & Registration<https://genomics.ed.ac.uk/event/rna-seq-data-analysis-3/>) 💻 Online: 16–19 June 2025 (Details & Registration<https://genomics.ed.ac.uk/event/rna-seq-data-analysis-4/>) Learn how to process and analyse bulk RNA sequencing data, from quality control to differential expression analysis, using widely adopted bioinformatics workflows. 🧬 Single-Cell RNA-Seq Data Analysis 📍 In-Person: 24–26 February 2025 (Details & Registration<https://genomics.ed.ac.uk/event/single-cell-rna-seq-data-analysis/>) 💻 Online: 23–25 June 2025 (Details & Registration<https://genomics.ed.ac.uk/event/single-cell-rna-seq-data-analysis-3/>) Explore cutting-edge single-cell transcriptomics analysis, covering pre-processing, clustering, and interpretation of complex datasets. Why join our courses? ✅ Expert-led instruction from experienced bioinformaticians ✅ Hands-on exercises with real-world datasets ✅ Small class sizes for personalised learning ✅ Flexible in-person and online formats These courses are ideal for researchers, bioinformaticians, and students looking to develop their skills in RNA sequencing data analysis. Spaces are limited—register now to secure your place! For any questions, feel free to get in touch. Best regards, Dr Kathryn Campbell Genomics and Bioinformatics Training Coordinator - Edinburgh Genomics School of Biological Sciences University of Edinburgh Email: kcampb2(a)ed.ac.uk [C0537FE1-6FA3-49DE-BC61-6312CF32C502.png] ======================================================== Edinburgh Genomics' Privacy Notice can be viewed at: http://genomics.ed.ac.uk/about-us/privacy-notice This email and any attachments are confidential and intended solely for the use of the recipient(s) to whom they are addressed. If you have received it in error, please destroy all copies and inform the sender. ======================================================== The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336. Is e buidheann carthannais a th’ ann an Oilthigh Dhùn Èideann, clàraichte an Alba, àireamh clàraidh SC005336.

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Extended deadline ECCO'2025 Combinatorial Optimization @Marrakech
by BeNeLux bioinformaticians forum 01 Feb '25

01 Feb '25

************************************************************************************* ECCO'2025 38th Conference of the European Chapter on Combinatorial Optimization 8-10 May 2025 Marrakech, Morocco https://ecco2025.sciencesconf.org ************************************************************************************* The 38th Conference of the European Chapter on Combinatorial Optimization will be held in Marrakech (Morocco) from 8 till 10 May 2025. AIMS The ECCO annual meetings aim to bring together researchers in Combinatorial Optimization to present their work, share experiences, and discuss recent advances in theory and applications. CALL FOR ABSTRACTS We invite all researchers, practitioners, and students interested in the following subject areas to submit an abstract: - Theory and applications of combinatorial optimization - Optimal solution methods, approximation algorithms and metaheuristics for combinatorial optimization problems - Integer programming, global optimization, stochastic integer programming, multi-objective programming, mixed optimization, graph theory and network flows - Application domains include, but are not limited to, logistics and supply chain optimization, manufacturing, energy production and distribution, land consolidation, telecommunications, bioinformatics, finance, discrete tomography, discrete and hybrid dynamical systems. IMPORTANT DATES Extended deadline for abstract submission 28 Feb 2025 Notification of acceptance 14 March 2025 Deadline for early registration 28 March 2025 ABSTRACT SUBMISSION Abstracts must be written in English and contain no more than 1,500 characters in plain text format (no formulas are allowed). Please note that the submission MUST be done by the person who will present the paper. For each submitted paper, ONE unique registration must be submitted (e.g., for two submitted papers, two separate registrations must be submitted). SOCIAL EVENTS Conference Dinner: Friday 9 May at Chez Ali PUBLICATIONS Book of Abstracts Special Issue: A special issue of the Journal of Combinatorial Optimization will be devoted in papers presented in the conference. All articles will be refereed according to the high standards of the journal. Details of the process will be given during the conference. COMMITTEES Conference chair El-Ghazali Talbi (chair), University of Lille, France Program and steering committee Jacek Blazewicz, Poznań University of Technology, Poland Bo Chen, University of Warwick, UK Van-Dat Cung, Université Grenoble Alpes, France Alain Hertz, Polytechnique Montréal, Canada Silvano Martello, Università di Bologna, Italy Greet Vanden Berghe, KU Leuven, Belgium El-Ghazali Talbi (chair), University of Lille and INRIA, France Paolo Toth, Università di Bologna, Italy CONTACT Prof. El-ghazali Talbi email: ecco2025(a)sciencesconf.org -- *********************************************************************** OLA'2025 International Conference on Optimization and Learning (SCOPUS, Springer) April 23-25, 2025, Dubai, https://ola2025.sciencesconf.org *********************************************************************** ********************************************************************** ECCO'2025 EURO Conference on the European Chapter of Combinatorial Optimization May 8-10, 2025, Marrakech, Morocco, http://ecco2025.sciencesconf.org *********************************************************************** Prof. El-ghazali TALBI Polytech'Lille, University Lille - INRIA CRISTAL - CNRS

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