- BBClist - maillist.psb.ugent.be

Principal Statistician at GSK, Belgium
by Laurent Gatto 15 Nov '21

15 Nov '21

Dan Lin's team at GSK is looking for a statistician working on translational statistics focused on high dimensional data analysis and Bayesian statistics. More details at https://www.linkedin.com/jobs/view/2710790119/

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Job opening for a Research Assistant in genomics and analysis of biological data in the MNHN, Paris.
by Lieven Sterck 15 Nov '21

15 Nov '21

We're seeking a Research Assistant in genomics and analysis of biological data. The position is open to MSc and PhD holders with a closing date on Nov 30th. The job is advertised for one year initially, with strong institutional will to sustain it thereafter. The "Data Analysis" team within the UMS2700 "Acquisition and Data Analysis for Natural History " ( [ https://www.researchgate.net/jobderef/957998/http%3A%2F%2Fwww.ums2700.mnhn.… | http://www.ums2700.mnhn.fr/ ] ) aims to provide a one-stop-shop for students and staff to support them with biostatistical and biological analysis of image and omics data, as well as offer them training in these fields. A specificity of the MNHN is that projects often concern very divergent taxa and unconventional biological models. The appointee will provide operational expertise in comparative and / or functional genomics to strengthen and promote research projects across the Museum. Applications by non-French speakers will be considered, yet some understanding of French is desirable. Full details on this position are available at [ https://www.mnhn.fr/fr/emplois-stages | https://www.mnhn.fr/fr/emplois-stages ] (Ingénieur en traitement des données biologiques (F/H)). With best wishes, Claire ++++++++++++++++++++ Prof. Claire GACHON Directrice de l'UMS 2700 - Analyse et Acquisition de Données (+33) 1 71 21 46 66 - [ mailto:direction-ums2700@mnhn.fr | direction-ums2700(a)mnhn.fr ] Muséum National d'Histoire Naturelle, CNRS CP 26, 57 rue Cuvier, 75005 Paris, France UMR 7245 - Molécules de Communication et Adaptation des Micro-organismes (+33) 1 40 79 31 33 - [ mailto:claire.gachon@mnhn.fr | claire.gachon(a)mnhn.fr ] Reader in Molecular Phycology Scottish Association for Marine Science, Scottish Marine Institute, PA37 1QA Oban United Kingdom (+44) 1631 559 318; [ mailto:claire.gachon@sams.ac.uk | claire.gachon(a)sams.ac.uk ] ; [ http://www.sams.ac.uk/claire-gachon | http://www.sams.ac.uk/claire-gachon ] ++++++++++++++++++++

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Migrating your tool to the cloud - lessons learnt - registration opan
by Alexander Botzki 12 Nov '21

12 Nov '21

Dear colleagues, On December 2nd, we are happy to invite you to afternoon session about migrating tools to the cloud. We will show you the possibilities and the pitfalls of transferring software tools to the cloud using real-life examples. Four scientists will testify about their experiences with implementing the tool that was developed in their lab in the cloud. We will end the workshop with a panel discussion. Interested? Please register at https://training.vib.be/all-trainings/migrating-tools-cloud-online Best regards, Alex Alexander Botzki - Head of VIB Bioinformatics Core, ELIXIR Belgium Training Coordinator VIB Bioinformatics Core Technologiepark-Zwijnaarde 75 9052 Zwijnaarde Belgium tel +32 9 224 9870 https://vib.be/labs/vib-bioinformatics-core/research | https://www.bits.vib.be | @vibbioinfocore [cid:image002.jpg@01D7D808.82CC3D00]

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TranSYS Online Training School, taking place on 24th – 26nd November 2020
by Kristel Van Steen 12 Nov '21

12 Nov '21

** please spread the word ** -- Dear, We are pleased to invite you to the *TranSYS Training School*, taking place on 24^th – 26^nd November 2021 hosted by Institut Pasteur, France. The *training is free *but registration is mandatory. Training can be followed online. Our second training school offers researchers and students broad training opportunities in scientific and transferable skills such as study design & protocol, data science, and communication & dissemination. This year's main theme is *data analysis*, seen from multiple viewpoints! TranSYS is an EU *Marie Sklodowska-Curie* funded Innovative Training Network dedicated to training highly skilled researchers in the new area of Systems Health, at the interface of translational research and systems medicine. Our researchers will develop tools and approaches to exploit large and complex datasets to advance Precision Medicine in several human disease areas. More information is available at https://h2020transys.eu/transys-data-analysis-winter-school/ and the QR code below; Please feel free to distribute the attached flyer. Looking forward to e-meeting you, Kristel Van Steen, TranSYS Coordinator -- Prof Dr Dr KRISTEL VAN STEEN http://bio3.giga.ulg.ac.be/ +32(0)485766597 -- CME - Center for Human Genetics - Systems Medicine Lab http://gbiomed.kuleuven.be/apps/cme/ -- GIGA-R, Medical Genomics - Systems Genetics Lab https://www.giga.uliege.be ---------------------------------------------------------

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Job ad: Bioinformatics engineer for the international dissemination of COVID-19 genomic data (data brokering)
by Olivier Sand 12 Nov '21

12 Nov '21

Dear all, The French Bioinformatics Institute (IFB, https://france-bioinformatique.fr/) national infrastructure in biology/health which federates 35 regional platforms and associated teams, as well as a coordinating unit, IFB-core (UMS CNRS 3601), is in charge of deploying a bioinformatics platform to collect, process and organise data from the EMERGEN genomic surveillance project, and to ensure submission of those data in international repositories. The 2 years starting funds are committed to COVID-19 data, but the project is intended to develop a sustainable infrastructure allowing a swift answer to other emerging infectious diseases. The IFB is recruiting a study engineer to take care of data brokering for the EMEGEN project. This will ensure the link between data producers and international repositories, in order to disseminate data and control data and metadata quality. Required diploma: master in bioinformatics or in biology with bioinformatics experience, genomics data processing, NGS, expertise in R or Python (knowledge in Django appreciated). The recruited person will be assigned to UMS CNRS 3601 IFB-core. It will be hosted by one of the IFB implementation sites associated to the EMERGEN project, Paris or Marseille. Its work will articulate with the other members of the IFB-EMERGEN team, which also includes people in charge of system process management (DevOps), database development (WebDev) and data analysis (workflows). See full advert and application details here: https://emploi.cnrs.fr/Offres/CDD/UMS3601-VALSAI-050/Default.aspx?lang=EN <https://www.france-bioinformatique.fr/en/jobs/bioinformatics-engineer-for-t…> Best wishes, Olivier Sand CNRS UMS3601 IFB-core

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Workshop: Migrating tools to the cloud
by Alexander HALKSWORTH 10 Nov '21

10 Nov '21

Hi all, I wanted to highlight and encourage those of you interested to sign up to the upcoming workshop on software migration to the cloud , on 02.12.21 @14:00 CET . Four scientists will testify about their experiences with implementing the tool that was developed in their lab in the cloud. The workshop will then end with a panel discussion. Spaces are limited, so make sure you sign up in good time. [ https://bit.ly/3obhx9u | << SIGN UP >> ] Kind regards, Alexander Halksworth - Communications & Community Outreach Officer Elixir@PSB VIB-UGent Center for Plant Systems Biology Ghent University Technologiepark-Zwijnaarde 71 - 9052 Ghent - Belgium Tel. +32(0)9 331 3 94 [ http://www.psb.ugent.be/ | https://www.elixir-belgium.org/ ] [ https://elixir-belgium.us14.list-manage.com/subscribe?u=d1bc1ab5d122d661a68… | Subscribe to our Newsletter ]

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Vacature docent data science for life sciences/bio-informatica en praktijkdocent bioinformatica
by Martijn van der Bruggen 07 Nov '21

07 Nov '21

De Hogeschool van Arnhem en Nijmegen heeft een vacature voor een docent data science for life sciences/bio-informatica en een vacature voor een praktijkdocent bioinformatica. Meer informatie is terug te vinden op onze website: Docent Data Science for Life Sciences/Informatica (han.nl)<https://www.han.nl/over-de-han/werken-bij-de-han/vacatures/docent-data-scie…> Praktijkdocent Bio-informatica (han.nl)<https://www.han.nl/over-de-han/werken-bij-de-han/vacatures/praktijkdocent-b…> Met vriendelijke groet, Martijn. Martijn van der Bruggen | Academiemanager ATBC | HAN_ University of Applied Sciences | Hogeschool van Arnhem en Nijmegen | Academie Toegepaste Biowetenschappen en Chemie | Postbus 6960, 6503 GL Nijmegen | Laan van Scheut 2 | LvS2 | M +31 6 55 20 63 44 | E Martijn.vanderBruggen(a)han.nl<mailto:Martijn.vanderBruggen@han.nl> | www.han.nl<http://www.han.nl/> | werkdagen maandag, dinsdag, woensdag, donderdag, vrijdag| [cid:image001.png@01D7D3F0.54409790]

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BSC: Life Sciences vacancy
by BSC Human Resources 04 Nov '21

04 Nov '21

Dear all, We would like to inform you about a new job opportunitiy offered by Barcelona Supercomputing Center: - Research Engineer (RE123). Deadline: 31 December, 2021 Link here <https://www.bsc.es/join-us/job-opportunities/35320lsiconbire123> We would appreciate that you share the information with your contacts. Sincerely, /Human Resources/* Barcelona Supercomputing Center – Centro Nacional de Supercomputación* Tel. +34- 934137745 <mailto:anais.delastre@bsc.es>www.bsc.es <http://www.bsc.es/>

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Postdoc and other computational research positions in Seattle, WA U.S.A.
by Wouter Meuleman 03 Nov '21

03 Nov '21

Dear BBC list, I'm excited about a new initiative applying recommender systems to genomics, and am looking to hire computational postdoctoral researchers, as well as otherwise experienced computational scientists. *Please share with those who you think might be a good fit.* Domain expertise in computational biology (in particular chromatin genomics) or recommender systems is preferred but not strictly required. What is important, is your enthusiasm for the subject matter, and an aptitude for large scale data exploration and analysis. *We have flexibility to consider international applicants*, and positions are available immediately, until filled. More background and information on how to apply: *https://www.meuleman.org/hiring/ <https://www.meuleman.org/hiring/>* If you are unsure about how you could contribute or fit in, please *do not self-select yourself out, but let’s talk*. People from traditionally underrepresented groups are particularly encouraged to apply: we want to hear from you. This is a great opportunity to make a big impact! Thanks, and have a great day, Wouter Meuleman Principal Investigator Altius Institute for Biomedical Sciences Seattle, WA U.S.A. https://www.meuleman.org

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Vacancies to fill
by Li Xue 29 Oct '21

29 Oct '21

Dear all, We have a couple of vacancies to fill. Please help to spread the word, via direct emails or social media: Vacancy - Bioinformatician multi-omics - Radboudumc <https://www.radboudumc.nl/en/vacancies/106901-bioinformatician-multi-omics> Vacancy - Data scientist | Postdoctoral researcher - Radboudumc <https://www.radboudumc.nl/en/vacancies/105722-data-scientist-postdoctoral-r…> Best regards Li Xue, on behalf of Peter-Bram

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