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Training on Visual Analytics for Life Sciences & Health - 2nd edition
by Marques Neves, Ana 28 Apr '21

28 Apr '21

Helis Academy: Training on Visual Analytics for Life Sciences & Health On the 28th of May 2021, Helis Academy and TU/e will organize the 2nd edition of the online course on Visual Analytics for Life Sciences & Health. This online program provides the opportunity to get insights on theory, current practice in industry and expected possible future practice in industry within just one day, right from behind your own PC. More information and registration is available here: https://helisacademy-visualanalytics-2ndedition.eventbrite.nl [A picture containing text Description automatically generated] Kind regards, [Eindhoven University of Technology] Rita Neves, M.Sc. Researcher | Eindhoven University of Technology | Department of Mathematics and Computer Science M: +351 914 878 562 | +31 (0)6 838 33 047<tel:+351%20914%20878%20562%20|%20+31%20(0)6%20838%2033%20047> E: a.r.m.marques.neves(a)tue.nl<mailto:a.r.m.marques.neves@tue.nl> A: Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven [https://img.mysignature.io/s/v3/0/d/a/0da47aae-d980-5ecc-919d-f6cbbc5bd6e2.…]<https://www.linkedin.com/in/rita-neves/>

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BSC: Life Sciences vacancy
by BSC Human Resources 27 Apr '21

27 Apr '21

Dear all, We would like to inform you about a new job opportunitiy offered by Barcelona Supercomputing Center: - Postdoctoral researcher in cancer germline genetics (R2). Deadline: 31 May, 2021 Link here <https://www.bsc.es/join-us/job-opportunities/19520lscbr2> We would appreciate that you share the information with your contacts. Sincerely, /Human Resources/* Barcelona Supercomputing Center – Centro Nacional de Supercomputación* Tel. +34- 934137745 <mailto:anais.delastre@bsc.es>www.bsc.es <http://www.bsc.es/> http://bsc.es/disclaimer

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Advertise your work and promote EuBIC 🎥
by EuBIC-MS 26 Apr '21

26 Apr '21

Hello everybody, We are invited to promote EuBIC-MS at the EuPA early career researchers’ day the 21st of June 2021. - You have developed a tool in the context of EuBIC? please send us video of maximum 3 min that promotes your work. These will be shown the 21st of June and made available on the EuBIC website. It is a great opportunity for you to advertise your work! Please contact Marie Locard-Paulet or answer to this email if you have any question regarding these videos. - You have a few minutes to spare? Please record a video of you telling us: What you like the most during EuBIC events How does EuBIC help your research? Why people should join EuBIC … These videos will be edited to make a longer promotion clip. Please let us know before the 14th of May if you want to participate. You can send your recordings (landscape format) before the end of May to Marie Locard-Paulet or David Bouyssié (cc of this email) via email. Go crazy, have fun and feel free to contact usif you want to help with video editing or if you have any question/suggestion. We are looking forwards to seeing your videos! The EuBIC team. Ps.: please talk about this, the more the merrier! ------ If you do not want to be contacted regarding EuBIC-MS in the future, please let us know to remove your contact details from our mailing list.

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Reminder: BioSB 2021 Call for abstracts & Young Investigator Award 2021
by Femke Francissen 26 Apr '21

26 Apr '21

Dear all, Please find below an update on the BioSB 2021 conference <http://www.aanmelder.nl/biosb2021> that will be held on June 15-16. *Reminder call for abstracts * There is only one week left to submit your abstract <https://www.aanmelder.nl/biosb2021/abstract-submission> for an *oral or highlight presentation* at the BioSB 2021 conference <http://www.aanmelder.nl/biosb2021>; *deadline: May 3rd (23:59)* The main programme of the conference will feature several parallel sessions that will be set up via abstract selection. You can submit an abstract for an oral presentation, a highlight presentation and/or for a poster or demo presentation. You can find the list with submission topics here <https://www.aanmelder.nl/biosb2021/submissiontopics>. Submissions about services and infrastructure for researchers in the life sciences are also welcome, please make sure you then also select the* ELIXIR-NL topic*. *Submission deadlines:* - Oral & highlight presentations: May 3, 2021 - 23h59 (will not be extended!) - Notification date: May 17, 2021 - Posters & demos: May 23, 2021 *Call BioSB Young Investigator Award 2021* You can nominate a young researcher for the BioSB Young Investigator Award 2021 <https://www.aanmelder.nl/biosb2021/yia> (12th edition). The award will be given to a promising young researcher in the bioinformatics or systems biology field. The candidate must have conducted his/her bioinformatics or systems biology research primarily in a Dutch institute.The winner will receive a prize of 500 Euros sponsored by the BioSB research school and will be invited to present an honorary lecture during the plenary program of BioSB 2021.* Nomination deadline: May 3rd!* *Keynote speakers* BioSB 2021 conference: - Sarah Teichmann, Head of Cellular Genetics and Senior Group Leader, Wellcome Sanger Institute - Edda Klipp, professor for Theoretical Biophysics, Humboldt-Universität zu Berlin (HUB) - Kathleen Marchal, Dept of Plant Biotechnology and Bioinformatics, Fac of Sciences; Department of Informatics, IDLab, IMEC, Ghent University *About the BioSB 2021 conference - 15-16 June 2021* The BioSB 2021 conference discusses the latest developments in bioinformatics, systems and computational biology and interrelated disciplines, and their wide-ranging applications in life sciences & health, agriculture, food & nutrition. The conference will be organized as a virtual conference, featuring: - keynote lectures - parallel sessions featuring selected, highlight and invited talks - poster & demo sessions - network breaks *Registration is open!* Find more information via the conference website: www.aanmelder.nl/biosb2021. We look forward to meeting you at our conference in June! Best regards, on behalf of the BioSB programme & organizing committees Femke Francissen *Femke Francissen* Community manager BioSB BioSB research school E-mail: femke.francissen(a)biosb.nl Website: w <http://goog_1921660760>ww.biosb.nl

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Galaxy Community Conference 2021
by Kim DE RUYCK 23 Apr '21

23 Apr '21

Dear, Having originally been planned to take place in Ghent, the 2021 Galaxy Community Conference will take place in a virtual format from 28 June to 10 July and bring together clinicians, researchers and students working in data science. The event features a training week (28 June - 2 July) , three days of conference (6-8 July) and concludes with a 2-days CollaborationFest (9-10 July) . All training sessions are pre-recorded and online support will be available. The conference days will include talks with live Q&A, posters, demos, birds-of-a-feather and social gatherings. The multi-day CoFest gives the opportunity to get involved and to improve the Galaxy ecosystem. As in previous editions, talks and poster presentations will be selected upon abstract submission. We welcome submissions that use, implement or extend the Galaxy platform and ecosystem, including integrating and analyzing datasets in any research area, enhancing reproducibility in computational analyses, and fostering collaboration in scientific workflow development. Both the [ https://www.vibconferences.be/events/gcc2021-virtual-edition | abstract submission ] (deadline 7 May) and [ https://www.vibconferences.be/events/gcc2021-virtual-edition | registration ] are open. If you are working in data intensive science (life sciences and beyond), GCC2021 is an ideal conference to share your work, learn from others, and find new collaborators. We look forward to meeting you there! Best regards, Kim De Ruyck -- Kim De Ruyck PhD Coordinator ELIXIR Belgium VIB-UGent Center for Plant Systems Biology Technologiepark 71, 9052 Ghent, Belgium [ http://www.elixir-belgium.org/ | www.elixir-belgium.org ] [ https://twitter.com/ELIXIRnodeBE | @ELIXIRnodeBE ] [ http://eepurl.com/cl-xOX | Subscribe to our mailing list ]

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Open positions
by Anna Aschenbrenner 22 Apr '21

22 Apr '21

+++ Open positions in the Schultze group in Bonn, Germany +++ We have several open positions (Postdoc and PhD level) in the Schultze group and are looking for enthusiastic new colleagues to join our team! We are an interdisciplinary group affiliated with the University of Bonn and the German Center for Neurodegenerative Diseases working in the field of systems medicine, genomics and immunoregulation encompassing wet lab work, sequencing, computation and bioinformatics. We are applying omics techniques, esp. scRNA-seq, to study human immunology and are thriving to learn more about the molecular mechanisms governing health and disease with a focus on inflammation and inflammaging. We are looking for passionately curious scientists with diverse backgrounds for wet lab, bioinformatic and computational projects. More detailed information can be found here: PhD (wet lab): bit.ly/2RmCRvY <https://t.co/pFK1Iq3zfN?amp=1> PhD (bioinfo): bit.ly/3s7B4aY <https://t.co/9kwB82AZPw?amp=1> Postdoc (computational): bit.ly/2RqC7pD <https://t.co/5EvmuhPn98?amp=1> Deadline: Apr 30, 2021 Don’t hesitate to contact us if you have further questions on the nature of the positions! Please spread the news! [image: UniBonn_12551-517_c.png] *Dr. rer. nat. **Anna C. Aschenbrenner* Team Leader Clinical Single Cell Omics University of Bonn | Life & Medical Sciences (LIMES) Institute Genomics & Immunoregulation | www.limes-institut-bonn.de <https://www.limes-institut-bonn.de/en/research/research-departments/unit-2/…> & German Center for Neurodegenerative Diseases (DZNE) | Systems Medicine Venusberg-Campus 1/99, 53127 Bonn, Germany | www.dzne.de <https://www.dzne.de/en/research/research-areas/systems-medicine/> Room: B.3.143 | phone: +49 228 43302 – 690

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Position System admin bioinformatics at Hanze UAS (Groningen)
by Noback MA, Michiel 21 Apr '21

21 Apr '21

We are looking for a System administrator System Engineer Linux | Data Steward (v21.0078) responsible for our Linux-based educational end research computational environment For details go to www.hanze.nl/vacatures<http://www.hanze.nl/vacatures> Met vriendelijke groeten, with kind regards, Michiel Noback Dr. M.A. Noback | Bioinformatics Senior Lecturer Institute for Life Science & Technology | Hanze University of Applied Sciences Phone +31-50-595 4691<mailto:+31-50-595%204691> | E-mail m.a.noback(a)pl.hanze.nl<mailto:m.a.noback@pl.hanze.nl> Room H1.90 (via H1.88) | Van Doorenveste

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SeqBiome is hiring a Lab Technician
by Claesson, Marcus 20 Apr '21

20 Apr '21

Do you want to work in a dynamic and rapidly growing start-up company offering cutting-edge microbiome sequencing and analysis for a wide array of environments? Do you have experience of DNA extraction, amplification and NGS library preparation? Send us your Cover letter, CV and references to info(a)seqbiome.com<mailto:info@seqbiome.com> Thanks -- Marcus J. Claesson, PhD Principal Investigator School of Microbiology & APC Microbiome Ireland University College Cork Western Road, Cork, Ireland Tel: +353-(0)21-4901390 Email: m.claesson(a)ucc.ie<mailto:m.claesson@ucc.ie> http://orcid.org/0000-0002-5712-0623

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Workshop: Containers & Workflow pipelines
by Tuur Muyldermans 16 Apr '21

16 Apr '21

Hi everyone, On Thursday 20 and Thursday 27 May 2020 ELIXIR Belgium and VIB are organizing an online workshop 'Containers and Workflow Pipelines for reproducible and automated data analysis<https://training.vib.be/all-trainings/containers-and-workflow-pipelines-rep…>'. The first day is dedicated to Containers (Docker & Singularity) which are great tools for code portability and analysis reproducibility. You will learn how to use and modify existing containers and build a container from scratch. On the second day, you will learn how to use Nextflow (DSL2) for building scalable and reproducible bioinformatics pipelines and running them on a personal computer, cluster and cloud. With the rising interest in these topics, we hope this might be of interest to you. We start from scratch, however expect prior bioinformatics & programming knowledge. The full program is online and last tickets are available via this link<https://training.vib.be/all-trainings/containers-and-workflow-pipelines-rep…>. Best regards, Tuur Muyldermans On behalf of the ELIXIR Belgium team Tuur Muyldermans Bioinformatics trainer (ELIXIR Belgium | VIB Bioinformatics Core) Lo²cus Gent Researchbuilding FSVM 2 Technologiepark 75, 9052 Zwijnaarde www.elixir-belgium.org<https://www.elixir-belgium.org/> | https://corefacilities.vib.be<https://corefacilities.vib.be/> Subscribe to our mailing list<http://eepurl.com/cl-xOX> [cid:image001.png@01D732DA.49B9ED60]

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Bioinformatician - Netherlands Cancer Institute
by p.dimitriadis＠nki.nl 15 Apr '21

15 Apr '21

Dear community members, Are you a highly motivated and talented computational biologist looking for a position to apply bioinformatics and machine learning in unique Melanona datasets ? Do you wish to join a multidisciplinary team working with advanced melanoma patient and contribute in improving personalized medicine and discover new therapies ? If yes, the Lab of Prof Christian Blank at the Netherlands Cancer institute is seeking for a bioinformatician to join the team. For more details visit the following link https://www.nki.nl/careers-study/vacancies/computational-biologist-personal… Please feel free to share this opening with anyone who may be interested. Best regards, Petros Dimitriadis Bionformatician Blank Lab Netherlands Cancer Institute

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