- BBClist - maillist.psb.ugent.be

Workshop on Genomics + Galaxy and Advanced Topics, January, Czech Republic
by Dave Clements 12 Nov '11

12 Nov '11

*2012 Workshop on Genomics * Český Krumlov, Czech Republic 8-25 January 2012 http://evomics.org/ The 2012 Workshop on Genomics covers various aspects of genomics focusing primarily on the analysis of next-generation sequencing data. With the addition new events, including a Galaxy Developers Workshop, and several multi-day Advance Topics courses, the 2012 Workshop is greatly expanded over previous years. ** Please see the event pages for more details and* please note that the preferred deadlines for these events are rapidly approaching!* * Core Workshop on Genomics: * 15 Nov 2011 Application review starts 8-21 Jan 2012 Workshop http://evomics.org/workshops/workshop-on-genomics/2012-genomics-cesky-kruml… *Advanced Topics Sessions: ** Programming with Python/Biopython for Genomic Data Analysis GMOD (GBrowse, JBrowse, WebApollo, Chado) Using R and Bioconductor to Analyze Genomic Data** * 15 Nov 2011 Application review starts 23-25 Jan 2012 Courses http://evomics.org/workshops/advanced-topics/ *Galaxy Developer Workshop: 23 January 2012 * 15 Dec 2011 Registration deadline 23 Jan 2012 Workshop http://evomics.org/workshops/galaxy-developer-workshop/ -- <http://evomics.org/workshops/galaxy-developer-workshop/> http://getgalaxy.org http://usegalaxy.org/ http://galaxyproject.org/wiki

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Academic position in computational biology and statistical genomics
by Michiel Van Bel 09 Nov '11

09 Nov '11

-- ================================================================== Michiel Van Bel PhD student Tel:+32 (0)9 331 36 95 fax:+32 (0)9 3313809 VIB Department of Plant Systems Biology, Ghent University Technologiepark 927, 9052 Gent, BELGIUM mibel(a)psb.vib-ugent.be http://www.psb.vib-ugent.be http://bioinformatics.psb.ugent.be ==================================================================

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Job opening: Bioinformatics training coordinator
by Joachim Jacob 07 Nov '11

07 Nov '11

Dear all, Do you enjoy helping colleagues out with bioinformatics problems? Then you might be interested in a new position at BITS, the Bioinformatics Training and Service facility of the VIB! BITS is looking for somebody who will coordinate and further develop the bioinformatics training program at VIB. You can start from January 1st 2012 on. The detailed jobdescription can be found on: http://dl.dropbox.com/u/18352887/JobOpening_BioinfoTrainingCoord_Jan2012.pdf Please feel free to forward this to any interested colleagues. Have a nice day! The BITS team ------------------------------ Joachim Jacob, PhD VIB Bioinformatics Training and Service facility VIB HQ Rijvisschestraat 120 9052 Gent Tel: 0032 9 244 66 34 bits(a)vib.be http://www.bits.vib.be

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BIOFINFORMATICS PhD/Postdoc on EPIGENOMICS (ULB, Brussels)
by Sylvain Brohée 07 Nov '11

07 Nov '11

BIOFINFORMATICS PhD/Postdoc on EPIGENOMICS (ULB, Brussels) Job description: PhD and Postdoctoral positions are available for successful candidates to join a dynamic team at the Laboratory of Cancer Epigenetics (Université Libre de Bruxelles). Our group is interested to study transcriptomics and epigenomics in health and diseases. The candidates, which will work within a bioinformatic environment, will tackle integrative analysis of higth-throughput transcriptomics and epigenomics data sets generated using cutting edge next-generation sequencing plateforms (available in host lab). Both fundamental and clinical aspects of human diseases will be addressed. Postdoc position is funded for 2 years, with possible extension. Screening of applications begins immediately and continues until an outstanding candidate is selected. Profile : Applicants should demonstrated proficiency in programming, and statistics and/or machine learning. Experience with sequence data, genome-wide data sets (ChIPSeq, RNASeq,…) will be assets. How to apply?; Informal enquiries, CV (+ ranking and grades during studies) and names of two referees should be send to: Dr. Matthieu Defrance (defrance(a)bigre.ulb.ac.be) and Dr. François Fuks (ffuks(a)ulb.ac.be) Laboratory of Cancer Epigenetics, Faculty of Medicine, Free University of Brussels, 808 route de Lennik, Brussels, Belgium. Tel.: 32-2-555 62 45. Fax: 32-2-555 62 57. Lab website: http://www.ulb.ac.be/medecine/fukslab Selected publications: Viré et al. Nature 2006; Brenner & Fuks Dev. Cell 2007; Villa et al. Cancer Cell 2007; Denis et al. Mol Cell Biol. 2009 ; Fuks F Nature. 2010; Dedeurwaerder, Defrance et al. EMBO Molecular Medicine. 2011 ; Dedeurwaerder*, Defrance* et al. Epigenomics 2011.

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Interesting Bioinformatics Position
by Thomas Binsl | Crosslinks BV 03 Nov '11

03 Nov '11

Dear all, Please find the description of an interesting position as Bioinformatics Consultant attached. In case that you are interested please contact Stephen Hutchison (s.hutchison(a)evols.co.uk<mailto:s.hutchison@evols.co.uk>). Kind regards, Thomas Thomas Binsl, PhD Senior Bioinformatician & Business Developer Crosslinks B.V. Tel. +31 6 27 14 08 33

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talk by A. Godzik
by Gipsi Lima-Mendez 03 Nov '11

03 Nov '11

Dear all, You may be interested in the following talk: Understanding functional disorder in proteins – examples from a stem cell regulatory network Adam Godzik In many proteins, the interplay between order and disorder is critical for their function. In the Joint Center for Structural Genomics we set out to map out and understand this balance in a group of transcription factors and regulatory complexes involved in stem cell differentiation. Many proteins in this network appear to be composed entirely of disordered regions, but upon more detailed analysis we started identifying small ordered "kernels" of order, possibly being switched on (and off) with post-translational modifications. With few of these "kernels" now confirmed by experimental structure determination we are applying these experiences to a broader range of human proteins Date: Nov, 15th VUB Room D.005, 12:00 Regards, Gipsi ---- Gipsi Lima-Mendez Bioinformatics and (Eco-)Systems Biology Faculty of Sciences and Bioengineering Sciences Vrije Universiteit Brussel VUB - MINT/BSB Pleinlaan 2 B-1050 Brussels Belgium Tel: +32-02-629 19 18 Fax: +32-02-629 19 02 gipsi.lima(a)vub.ac.be

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Call for applications for a postdoctoral research fellowship in bioinformatics related to basic diabetes research
by Sylvain Brohée 03 Nov '11

03 Nov '11

---------- Forwarded Message ---------- Subject: Call for applications for a postdoctoral research fellowship in bioinformatics related to basic diabetes research Date: Wednesday, November 02, 2011 From: Bontempi Gianluca <gbonte(a)ulb.ac.be> To: undisclosed-recipients: -------------------------------------------------------

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postdoc in Computational Biology at VIB/UGent
by Stefanie De Bodt 28 Oct '11

28 Oct '11

Dear all, We have a job opening for a postdoctoral scientist in Bioinformatics who will be involved in the integrative analysis of RNA-seq data and growth phenotype data. More detailed information can be found in attach. Please forward to any interested colleagues. Kind regards, Stefanie De Bodt (our apologies for multiple posting) -- ================================================================== Stefanie De Bodt, PhD VIB Department of Plant Systems Biology, UGent Technologiepark 927 B-9052 Gent Belgium Tel: 32 (0)9 3313692 Website: http://www.psb.ugent.be ==================================================================

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Fwd: Meeting on Epigenomics-Next-Gen Sequencing, ULB Erasme
by Sylvain Brohée 27 Oct '11

27 Oct '11

---------- Forwarded Message ---------- Subject: Meeting on Epigenomics-Next-Gen Sequencing, ULB Erasme Date: Wednesday, October 26, 2011 From: Iolanda Mazza <imazza(a)ulb.ac.be> To: ffuks(a)ulb.ac.be Dear Friend and Colleague, François Fuks and Illumina are co-organizing a one-day meeting on Epigenetics/Epigenomics technologies. Where: Campus Erasme, Free University of Brussels (ULB) When: Wednesday, November 16, 2011 Programme: Please see attached flyer May you kindly advertise this meeting by displaying the attached flyer to your colleagues who can be interested? We would like to thank you in advance for your help. Best wishes, Iolanda Mazza ___________________________________________ Secretary to Dr. François Fuks Laboratory of Cancer Epigenetics Free University of Brussels (U.L.B.) Faculty of Medicine, C.P. 614, Bât. GE, 5th floor 808 route de Lennik tel.: 32-2-555 62 45 B-1070 Brussels fax: 32-2-555 62 57 lab website: http://www.ulb.ac.be/medecine/fukslab Iolanda MAZZA, Secrétaire Laboratoire d'Epigénétique du Cancer (anciennement Virologie Moléculaire) Directeur : François FUKS Université Libre de Bruxelles Faculté de Médecine Bat. G, 5e étage, Bureau G1.5.209 Route de Lennik 808, CP 614 1070 Bruxelles - BELGIQUE Tel. 0032(0)2/555.62.35 Fax. 0032(0)2/555.62.57 e-mail : imazza(a)ulb.ac.be http://www.brusselsepigeneticsmeeting.net/ -------------------------------------------------------

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two vacancies for "Associates Bioinformatics "
by Jennen Danyel (TGX) 26 Oct '11

26 Oct '11

Dear all, Currently, we have two vacancies for the position of "Associates Bioinformatics" within our Dept. of Toxicogenomics, Maastricht University, the Netherlands. Could you please distribute the below mentioned links within your network? 1. http://www.academictransfer.com/employer/UM/vacancy/11625/lang/en/ 2. http://www.academictransfer.com/employer/UM/vacancy/11624/lang/en/ Kind regards, Danyel Jennen [cid:054155007@26102011-2692] Danyel Jennen Researcher Department of Toxicogenomics danyel.jennen(a)maastrichtuniversity.nl <mailto:danyel.jennen@maastrichtuniversity.nl> www.maastrichtuniversity.nl <http://www.maastrichtuniversity.nl/> Universiteitssingel 50, 6229 ER Maastricht P.O. Box 616, 6200 MD Maastricht, The Netherlands T +31 (0)43-3881094 F +31 (0)43-3884146 website: www.toxicogenomics.nl [cid:054155007@26102011-2699] Please consider your environmental responsibility before printing this e-mail.

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