- BBClist - maillist.psb.ugent.be

Job ad: Bioinformatics engineer for the international dissemination of COVID-19 genomic data (data brokering)
by Olivier Sand 12 Nov '21

12 Nov '21

Dear all, The French Bioinformatics Institute (IFB, https://france-bioinformatique.fr/) national infrastructure in biology/health which federates 35 regional platforms and associated teams, as well as a coordinating unit, IFB-core (UMS CNRS 3601), is in charge of deploying a bioinformatics platform to collect, process and organise data from the EMERGEN genomic surveillance project, and to ensure submission of those data in international repositories. The 2 years starting funds are committed to COVID-19 data, but the project is intended to develop a sustainable infrastructure allowing a swift answer to other emerging infectious diseases. The IFB is recruiting a study engineer to take care of data brokering for the EMEGEN project. This will ensure the link between data producers and international repositories, in order to disseminate data and control data and metadata quality. Required diploma: master in bioinformatics or in biology with bioinformatics experience, genomics data processing, NGS, expertise in R or Python (knowledge in Django appreciated). The recruited person will be assigned to UMS CNRS 3601 IFB-core. It will be hosted by one of the IFB implementation sites associated to the EMERGEN project, Paris or Marseille. Its work will articulate with the other members of the IFB-EMERGEN team, which also includes people in charge of system process management (DevOps), database development (WebDev) and data analysis (workflows). See full advert and application details here: https://emploi.cnrs.fr/Offres/CDD/UMS3601-VALSAI-050/Default.aspx?lang=EN <https://www.france-bioinformatique.fr/en/jobs/bioinformatics-engineer-for-t…> Best wishes, Olivier Sand CNRS UMS3601 IFB-core

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Workshop: Migrating tools to the cloud
by Alexander HALKSWORTH 10 Nov '21

10 Nov '21

Hi all, I wanted to highlight and encourage those of you interested to sign up to the upcoming workshop on software migration to the cloud , on 02.12.21 @14:00 CET . Four scientists will testify about their experiences with implementing the tool that was developed in their lab in the cloud. The workshop will then end with a panel discussion. Spaces are limited, so make sure you sign up in good time. [ https://bit.ly/3obhx9u | << SIGN UP >> ] Kind regards, Alexander Halksworth - Communications & Community Outreach Officer Elixir@PSB VIB-UGent Center for Plant Systems Biology Ghent University Technologiepark-Zwijnaarde 71 - 9052 Ghent - Belgium Tel. +32(0)9 331 3 94 [ http://www.psb.ugent.be/ | https://www.elixir-belgium.org/ ] [ https://elixir-belgium.us14.list-manage.com/subscribe?u=d1bc1ab5d122d661a68… | Subscribe to our Newsletter ]

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Vacature docent data science for life sciences/bio-informatica en praktijkdocent bioinformatica
by Martijn van der Bruggen 07 Nov '21

07 Nov '21

De Hogeschool van Arnhem en Nijmegen heeft een vacature voor een docent data science for life sciences/bio-informatica en een vacature voor een praktijkdocent bioinformatica. Meer informatie is terug te vinden op onze website: Docent Data Science for Life Sciences/Informatica (han.nl)<https://www.han.nl/over-de-han/werken-bij-de-han/vacatures/docent-data-scie…> Praktijkdocent Bio-informatica (han.nl)<https://www.han.nl/over-de-han/werken-bij-de-han/vacatures/praktijkdocent-b…> Met vriendelijke groet, Martijn. Martijn van der Bruggen | Academiemanager ATBC | HAN_ University of Applied Sciences | Hogeschool van Arnhem en Nijmegen | Academie Toegepaste Biowetenschappen en Chemie | Postbus 6960, 6503 GL Nijmegen | Laan van Scheut 2 | LvS2 | M +31 6 55 20 63 44 | E Martijn.vanderBruggen(a)han.nl<mailto:Martijn.vanderBruggen@han.nl> | www.han.nl<http://www.han.nl/> | werkdagen maandag, dinsdag, woensdag, donderdag, vrijdag| [cid:image001.png@01D7D3F0.54409790]

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BSC: Life Sciences vacancy
by BSC Human Resources 04 Nov '21

04 Nov '21

Dear all, We would like to inform you about a new job opportunitiy offered by Barcelona Supercomputing Center: - Research Engineer (RE123). Deadline: 31 December, 2021 Link here <https://www.bsc.es/join-us/job-opportunities/35320lsiconbire123> We would appreciate that you share the information with your contacts. Sincerely, /Human Resources/* Barcelona Supercomputing Center – Centro Nacional de Supercomputación* Tel. +34- 934137745 <mailto:anais.delastre@bsc.es>www.bsc.es <http://www.bsc.es/>

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Postdoc and other computational research positions in Seattle, WA U.S.A.
by Wouter Meuleman 03 Nov '21

03 Nov '21

Dear BBC list, I'm excited about a new initiative applying recommender systems to genomics, and am looking to hire computational postdoctoral researchers, as well as otherwise experienced computational scientists. *Please share with those who you think might be a good fit.* Domain expertise in computational biology (in particular chromatin genomics) or recommender systems is preferred but not strictly required. What is important, is your enthusiasm for the subject matter, and an aptitude for large scale data exploration and analysis. *We have flexibility to consider international applicants*, and positions are available immediately, until filled. More background and information on how to apply: *https://www.meuleman.org/hiring/ <https://www.meuleman.org/hiring/>* If you are unsure about how you could contribute or fit in, please *do not self-select yourself out, but let’s talk*. People from traditionally underrepresented groups are particularly encouraged to apply: we want to hear from you. This is a great opportunity to make a big impact! Thanks, and have a great day, Wouter Meuleman Principal Investigator Altius Institute for Biomedical Sciences Seattle, WA U.S.A. https://www.meuleman.org

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Vacancies to fill
by Li Xue 29 Oct '21

29 Oct '21

Dear all, We have a couple of vacancies to fill. Please help to spread the word, via direct emails or social media: Vacancy - Bioinformatician multi-omics - Radboudumc <https://www.radboudumc.nl/en/vacancies/106901-bioinformatician-multi-omics> Vacancy - Data scientist | Postdoctoral researcher - Radboudumc <https://www.radboudumc.nl/en/vacancies/105722-data-scientist-postdoctoral-r…> Best regards Li Xue, on behalf of Peter-Bram

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Bioinformatics position
by bram.slabbinck＠agilent.com 28 Oct '21

28 Oct '21

Hi Agilent Technologies is currently hiring a bioinformatician/biostatistician to strengthen its genomics software team based in Ghent, Belgium. Do you have profound variant calling experience in the field of human genomics and are interested in combining your expertise with customer-facing software development, this role might be a nice opportunity. For more information and/or applying, please visit https://www.linkedin.com/jobs/view/bioinformatician-f-m-d-at-agilent-techno… Regards Bram Slabbinck, PhD [http://www.agilent.com/labs/images/Agilent_Logo_Tag_v_RGB_1.33w.png]<http://www.agilent.com/> R&D scientist bioinformatics Genomics Agilent Technologies T: +32 9 277 77 13 | www.agilent.com<http://www.agilent.com/>

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PhD position in algorithms for microbial genomics
by Jasmijn Baaijens 25 Oct '21

25 Oct '21

Dear colleagues, We are looking for a PhD student to work on algorithms for microbial genomics at TU Delft. The ideal candidate has a background in computer science, mathematics or bioinformatics, with strong skills in algorithm development and data analysis. The position is fully funded with a duration of 4 years. Read more and apply at: https://www.tudelft.nl/over-tu-delft/werken-bij-tu-delft/vacatures/details?… Please forward this email to any suitable candidates! Best regards, Jasmijn Baaijens — Assistant Professor Pattern Recognition & Bioinformatics, TU Delft

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BBClist job vacancies
by Secretariat-bigcat (BIGCAT) 21 Oct '21

21 Oct '21

?To whom it may concern. Good morning, I'm writing to inquire as to whether it is possible to send out job vacancies via the BBClist mail list? I inquire on behalf of the Department of Bioinformatics at Maastricht University, where we currently have three job vacancies; two post docs and one PhD position. Please let me know if this would be possible, and, if so, what information you would require. I am registered with the BBClist, under the email in cc. Thank you in advance. Best wishes, Rachel. ________________________________________________________________ Rachel Vaden Allison Secretary | Department of Bioinformatics-BiGCaT Faculty of Health, Medicine, and Life Sciences | Maastricht University r.allison(a)maastrichtuniversity.nl<mailto:r.allison@maastrichtuniversity.nl> secretariat-bigcat(a)maastrichtuniversity.nl<mailto:secretariat-bigcat@maastrichtuniversity.nl> www.maastrichtuniversity.nl<http://www.maastrichtuniversity.nl/> Universiteitssingel 60 M1.10 | 6229 ER Maastricht Postbus 616, 6200 MD Maastricht, The Netherlands? T +31 (0)43 38 81999 (Present Monday-Thursday 09.00-14.00) Disclaimer<https://www.maastrichtuniversity.nl/disclaimer> Please consider your humanitarian responsibility before printing this e-mail.??????

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Postdoc position in Paris
by Juan Rodriguez Rivas 20 Oct '21

20 Oct '21

Dear Colleagues, Please find attached a PDF for a postdoc position to work on epistatic landscapes of phenotypic effects, protein-protein interactions and structural bioinformatics in the Analytical Genomics lab at the Sorbonne University in Paris. Best wishes, Juan

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